Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00763 ATGGAATTGCGAAGATATTGCCCTATGGCTTTTGTGCGATGGAGTTTCTTGGCTTGGTTTATTTTCTTTTCTGTGGGACTTGAGACCCTTGCCAGTTCCTGTGACCAGCATGATTTGTTGGCCCTGAAGGAATTTGCTGGCAACCTTACAAAAGGGTCTATTATCACAGCATGGTCAGATGATGTTTTCTGCTGCAAATGGGTTGGAGTTGTTTGTGATGATGTGGTTGATGGAGGTAGTAGAGTGTCCAAGTTGATTCTACCTAGAATGGGTCTTAACGGCACAATTTCAAGTTCTTTAGCTTATCTGGATCAGCTGAAAGTGCTTGATATTTCGTTCAACCGTCTCCAAGGTGGATTGCCTTCCGAGTTCTCTAATTTGAAGCAGTTAGAAGTTCTTGATCTGAGCCATAATATTCTGTCTGGACCACTTTTTGGTGCACTCTCTGGTTTACAATCCATTCAGATACTGAATATTTCTAGCAATTTATTTGTTGGAGATCTCTTCCAATTCGGGGGATTAGAACATCTCGTTGCTCTCAACATAAGCAACAATTCATTAACGGGCCAGTTCAATTCTCAAATTTGCAGCTTCTCTAAGGGTATTCATATTCTTGATATATCACAAAATAATTTTTCTGGTGGTCTTGAATGGTTGGGAAACTGCAGCACTTCCCTCCAAGAGTTACATTTGGATTCCAATTTTTTCACTGGCTATCTTCCTGATTCCTTGTATTCAATGTCAGCATTGGAGCAGCTCTCAGTCTCTATGAACTACCTCTCCGGTCAGTTAAGCATGAAGCTAAGTAACCTCTCAAACTTAAAATCTTTAATAATTTCTGGAAACCGGTTTTCTGGGGAGATCCCAAATGTTTTTGGGAATCTTTCGGACCTTGAACAGCTAATAGGGCACTCCAATTCATTTTCTGGATCATTGCCTTCCACCTTGGCCTTATGCTCAAAACTTCAAGTTCTTGATCTTCGAAATAATTCTTTGACAGGTTCTGTTAGCCTTAATTTCTCTGGGTTGTCTAATCTTTCCACGTTAGACCTTGGTAGTAATCATTTTAATGGACCCCTTCCAAATTCTGTTTCCAATTGCCATGAATTGACAATGTTAAGCCTTGCAAAAAATGAATTAACTGGCCAAATCCCCGAGAGTTATGCAAACCTCACTTCACTTTTGACTCTGTCTCTCTCAAACAACAGTTTTGAGAACCTATCTGGGGCGCTTTATGTACTGCAGCACTGCAAAAATCTCACAACTCTTATCCTCACAAAGAATTTCCACGGTGAAGAAATTTCAGAAAACTTAACGGTAAGCTTCAAGAGCCTTGTGGTGTTAGCACTTGGAAATTGTGGTCTCAAAGGCCATATTCCTGCTTGGCTGTTAAATTGCTCGAGATTGGAAGTTCTTGATTTGTCATGGAACCATTTGGAAGGAAGTGTCCCTTCTTGGATTGGTTGGATGGATCATCTGTTCTACTTGGATTTGTCAAATAATTCTCTTACTGGAGAAATACCAAAAGGTTTAACAGAGCTGAAGGGCCTCATATCCCTAAATTATCATATATCAAGTCTTTTTTCATCTTCTGCTATTCCTCTCTATGTCAAGAGAAACAAGAGTGCCAATGGGTTGCAATATAACCATGCTTCGAGTTTCCCTCCATCAATATACTTGAGCAATAACAGATTAAGTGGAACAATATGGCCTGAAATCGGTCGTTTGAGAGAACTTCATATCTTAGATTTAAGCAGGAACAACATCACCGGCACAATTCCCAGCTCTATTTCTGAGATGAAGAATTTGGAAACATTAGACTTGTCTAATAATAATCTATACGGAACTATTCCTCCATCATTTAACAACCTCACATTCTTGTCCAAGTTCAGTGTGGCATATAATCACTTATGGGGAACAATTCCAGCTGGGGGACAATTTTCAAGTTTCCCAAATTCAAGCTTTGAGGGCAACCTTGGTCTTTGTGGAGAAACATACAATCATTGTAACAAAGAAAAAACTATCGACATTTCCACTCATTCATCGGGTAAATTCGGTAAAAACAGTGTCCTTGGCATCACAATTGGTTCAGGAGTGGGCCTTGCACTACTTATTGCAGTTATTCTGCTAAGAATGTCAAAGAAGGATGAGGATAAACCAGTGGATAACTTTGATGAGGAGCTTAGCTTTCCAAACAGGATACCCGAAGCAGTTGTCACTTCAAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTGAAGATTTGATCAAATCTACCAACAACTTCAACCAAGAAAACATAATTGGTTGTGGTGGGTTTGGCCTTGTCTACAAGGCAAATCTTCCAAATGGTAGAAAGGTAGCTGTCAAGAAACTTTCAGGATACTGTGGTCAGGTAGAACGAGAATTCCAAGCAGAAGTGGAGGCACTCTCTAGAGCTCAACATAAGAACCTTGTTTCACTCAAAGGTTATTGTCAGCATGTCAACGACAGATTGTTAATTTACTCCTACTTGGAGAATGGAAGCCTTGACTATTGGTTGCATGAGAGCGAGAATGGAAATTCAGCTCTACAATGGAATGTAAGGCTCAAGATTGCTCAAGGTGCAGCTCATGGACTAGCTTATTTGCACAAGGAGTGTGAACCACATATTGTGCACAGAGATATTAAATCTAGCAACATACTTTTGGATGATAAATTCGAAGCTTATTTGGCTGATTTTGGACTTTCAAGGCTACTTCAACCCTATGATACACATGTTTCAACAGATTTAGTTGGAACTTTAGGATATATTCCTCCAGAATATAGTCAAGCACTGAAAGCGACATTCAAAGGTGATATTTACAGCTTTGGTGTTGTTCTTTTTGAGCTTCTTACTGGTCGAAGGCCTGTAGAAGTCATTGTGGGGCAATGCAGCAGGAATCTAGTGTCTTGGGTGTTTCAGATGAAATCTGAAAATAGGAATCAAGAAATTTTTGATTCAGTAATTTGGCACAAGGATATTGAGAAACAGCTCTTAGAGGTACTAGCTATTGCTTGTAAATGTATAGATGCAGATCCAAGGCAGAGACCCCATATTGAATTAGTTGTTTCATGGCTTGATGGTGTAGGATTTGATGGCTCTCAACAGTCATCATCTTAA 3153 0.3964 MELRRYCPMAFVRWSFLAWFIFFSVGLETLASSCDQHDLLALKEFAGNLTKGSIITAWSDDVFCCKWVGVVCDDVVDGGSRVSKLILPRMGLNGTISSSLAYLDQLKVLDISFNRLQGGLPSEFSNLKQLEVLDLSHNILSGPLFGALSGLQSIQILNISSNLFVGDLFQFGGLEHLVALNISNNSLTGQFNSQICSFSKGIHILDISQNNFSGGLEWLGNCSTSLQELHLDSNFFTGYLPDSLYSMSALEQLSVSMNYLSGQLSMKLSNLSNLKSLIISGNRFSGEIPNVFGNLSDLEQLIGHSNSFSGSLPSTLALCSKLQVLDLRNNSLTGSVSLNFSGLSNLSTLDLGSNHFNGPLPNSVSNCHELTMLSLAKNELTGQIPESYANLTSLLTLSLSNNSFENLSGALYVLQHCKNLTTLILTKNFHGEEISENLTVSFKSLVVLALGNCGLKGHIPAWLLNCSRLEVLDLSWNHLEGSVPSWIGWMDHLFYLDLSNNSLTGEIPKGLTELKGLISLNYHISSLFSSSAIPLYVKRNKSANGLQYNHASSFPPSIYLSNNRLSGTIWPEIGRLRELHILDLSRNNITGTIPSSISEMKNLETLDLSNNNLYGTIPPSFNNLTFLSKFSVAYNHLWGTIPAGGQFSSFPNSSFEGNLGLCGETYNHCNKEKTIDISTHSSGKFGKNSVLGITIGSGVGLALLIAVILLRMSKKDEDKPVDNFDEELSFPNRIPEAVVTSKLVLFQNSDCKDLTVEDLIKSTNNFNQENIIGCGGFGLVYKANLPNGRKVAVKKLSGYCGQVEREFQAEVEALSRAQHKNLVSLKGYCQHVNDRLLIYSYLENGSLDYWLHESENGNSALQWNVRLKIAQGAAHGLAYLHKECEPHIVHRDIKSSNILLDDKFEAYLADFGLSRLLQPYDTHVSTDLVGTLGYIPPEYSQALKATFKGDIYSFGVVLFELLTGRRPVEVIVGQCSRNLVSWVFQMKSENRNQEIFDSVIWHKDIEKQLLEVLAIACKCIDADPRQRPHIELVVSWLDGVGFDGSQQSSS 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00763 1050 ProSiteProfiles Leucine-rich repeat profile. 602 624 IPR001611 GO:0005515
Viun11g00763 1050 CDD STKc_IRAK 772 1039 - -
Viun11g00763 1050 Pfam Leucine Rich Repeat 273 295 IPR001611 GO:0005515
Viun11g00763 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Viun11g00763 1050 Pfam Protein kinase domain 767 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00763 1050 SMART LRR_sd22_2 247 273 - -
Viun11g00763 1050 SMART LRR_sd22_2 490 513 - -
Viun11g00763 1050 SMART LRR_sd22_2 319 348 - -
Viun11g00763 1050 SMART LRR_sd22_2 391 409 - -
Viun11g00763 1050 SMART LRR_sd22_2 576 599 - -
Viun11g00763 1050 SMART LRR_sd22_2 103 129 - -
Viun11g00763 1050 SMART LRR_sd22_2 600 626 - -
Viun11g00763 1050 Gene3D Transferase(Phosphotransferase) domain 1 842 1042 - -
Viun11g00763 1050 SMART serkin_6 766 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00763 1050 SUPERFAMILY Protein kinase-like (PK-like) 748 1037 IPR011009 -
Viun11g00763 1050 FunFam Tyrosine-sulfated glycopeptide receptor 1 340 674 - -
Viun11g00763 1050 FunFam Phytosulfokine receptor 1 729 841 - -
Viun11g00763 1050 Gene3D Ribonuclease Inhibitor 390 677 IPR032675 -
Viun11g00763 1050 SUPERFAMILY RNI-like 220 528 - -
Viun11g00763 1050 SUPERFAMILY L domain-like 51 301 - -
Viun11g00763 1050 Gene3D Ribonuclease Inhibitor 34 169 IPR032675 -
Viun11g00763 1050 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Viun11g00763 1050 SMART LRR_typ_2 490 514 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 271 294 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 600 623 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 343 367 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 127 150 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 391 414 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 103 126 IPR003591 -
Viun11g00763 1050 SMART LRR_typ_2 576 599 IPR003591 -
Viun11g00763 1050 PANTHER LEUCINE RICH REPEAT KINASE 2 280 1038 - -
Viun11g00763 1050 SUPERFAMILY L domain-like 546 662 - -
Viun11g00763 1050 FunFam Leucine-rich repeat receptor-like protein kinase 842 1048 - -
Viun11g00763 1050 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 302 - -
Viun11g00763 1050 PRINTS Leucine-rich repeat signature 600 613 - -
Viun11g00763 1050 PRINTS Leucine-rich repeat signature 493 506 - -
Viun11g00763 1050 Gene3D Phosphorylase Kinase; domain 1 732 841 - -
Viun11g00763 1050 ProSitePatterns Protein kinases ATP-binding region signature. 772 795 IPR017441 GO:0005524
Viun11g00763 1050 ProSiteProfiles Protein kinase domain profile. 766 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00763 1050 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Viun11g00763 1050 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Viun11g00763 1050 Pfam Leucine rich repeat 321 380 IPR001611 GO:0005515
Viun11g00763 1050 Pfam Leucine rich repeat 577 637 IPR001611 GO:0005515
Viun11g00763 1050 Gene3D Ribonuclease Inhibitor 170 389 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00763 Viun-Chr11 10190891 10194769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00763 40 420 Receptor kinase-like Gene Family AT1G55610 24.943 1.16e-20 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Viun11g00763 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00763 - - gmx:100789534 1753.8