Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00755 ATGGCTCTTTGGTGCTCGAAATTCTTTTTTGCTGCTCTTTCTGAAATTCTTTTCTCAGCTCAACATTGTGTTTCCACAAAAGCTCTTCGCTCCCGCTCAATGGCACTCACTTTGGAAATTTTATTCGTTGTCTTCCTCCTTAACAATGTCGCCGGAGCAGAATATTTCGCCGGAGACGAGACACGGGAGGATGATGATAAAGTGACAAATTTGCCCGGACAACCACCGGTGAATTTTAGTCACTATGCTGGTTATGTGAAGTTAAGACCAGAAGAAGAGAAAGCACTATTTTACTGGTTCTTTGAAGCTCAAGAGTCTCCATCGGATAAACCTCTTGTGCTTTGGCTTAGTGGAGGACCTGGTTGTTCATCTGTTGCTTTTGGAGCAGCACAAGAGATTGGTCCATTTCATGTAGATGACCCTGAGCATATTACCTTCAACAAATTCTCCTGGAATAGAGTCGCCAACGTCATATTCTTGGAATCACCTATTAGTGTGGGTTTTTCTTACACTAATAATTCCGATGACTTAAGCAAGATCGGAGATCAAGTGGTTGCCCTTGATAACTATGCTTTTTTAGTTGGTTGGTTTAAGAGATTTCCAAGATTCATATCCCATGAATTTTATATCATAGGAGAGAGCTATGGAGGACATTATGCTCCACAACTAGCTGAGGTTATACATGAAGGAAACAAAAATGGCACTTACATAAATCTTAAGGGATTCATGATGGGAAATGCTGTGATCAACGATGTCACAGATCTGAAAGGCGTATTTGATTTTGCTTTGTGCCATGCCATAATTTCAAAGCAAGTATATGATGGCATAAGAGAGAATTGCGATTTCATGGCAAAAAACAACACAAAGGAATGTAGTTGGAAAGTGGGCAAATTTTTGCAGGCCTATTCTGACATAAATATATTTAGTATTTACTCTCCCGTCTGTCTCATTGACTATGAAAGACCAGTTTCAAGTATGCTTGATGTTGCTCCGTATGCTGTCTCAGAAATTGACCTCCAGAATATGATTCCAACAATGGGTTACGATCCTTGTAAAGTTAATGATGTGGAAAAGTATTTCAATAAGAAGGATGTTCAGAAGGCCATTCATGCATACTTCCCTAACATGTCTGATCCCTACACCCTATGCAGCACTAAAATTAAAAAATGGAATGATTCACCGATCACAGTTCTCCCAGTGATTCAGAAACTCTTGCGTGCCGGTTTACGCATTTGGATGTACAGTGGAGACACTGATGGTAGAATTCCAGTGTTATCAACGAGATACGGTTTGCGAGAGCTGAAACTGAATGTAACGAAAGAGTGGAGAGCTTGGTTTGAAGGAAGAGAAGTGGGAGGATGGGTGGAGGAGTACGAGGGTGGTCTCACTTTTGCCTCTATTAGAGGTACTGGCCACTTCGTTCCAATTTATAAACCACAAGAAGCTCTTTCTCTCTTCTCCCACTTCCTCTCTGCTCAACCACTTCCATCGTCTCGCTTTTGA 1503 0.4118 MALWCSKFFFAALSEILFSAQHCVSTKALRSRSMALTLEILFVVFLLNNVAGAEYFAGDETREDDDKVTNLPGQPPVNFSHYAGYVKLRPEEEKALFYWFFEAQESPSDKPLVLWLSGGPGCSSVAFGAAQEIGPFHVDDPEHITFNKFSWNRVANVIFLESPISVGFSYTNNSDDLSKIGDQVVALDNYAFLVGWFKRFPRFISHEFYIIGESYGGHYAPQLAEVIHEGNKNGTYINLKGFMMGNAVINDVTDLKGVFDFALCHAIISKQVYDGIRENCDFMAKNNTKECSWKVGKFLQAYSDINIFSIYSPVCLIDYERPVSSMLDVAPYAVSEIDLQNMIPTMGYDPCKVNDVEKYFNKKDVQKAIHAYFPNMSDPYTLCSTKIKKWNDSPITVLPVIQKLLRAGLRIWMYSGDTDGRIPVLSTRYGLRELKLNVTKEWRAWFEGREVGGWVEEYEGGLTFASIRGTGHFVPIYKPQEALSLFSHFLSAQPLPSSRF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00755 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 67 479 IPR001563 GO:0004185|GO:0006508
Viun11g00755 500 Gene3D - 397 491 - -
Viun11g00755 500 Gene3D - 351 387 - -
Viun11g00755 500 FunFam Carboxypeptidase 397 492 - -
Viun11g00755 500 FunFam Carboxypeptidase 62 317 - -
Viun11g00755 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Viun11g00755 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 196 221 IPR001563 GO:0004185|GO:0006508
Viun11g00755 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 170 IPR001563 GO:0004185|GO:0006508
Viun11g00755 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 159 IPR001563 GO:0004185|GO:0006508
Viun11g00755 500 SUPERFAMILY alpha/beta-Hydrolases 65 497 IPR029058 -
Viun11g00755 500 Gene3D alpha/beta hydrolase 62 317 IPR029058 -
Viun11g00755 500 ProSitePatterns Serine carboxypeptidases, serine active site. 210 217 IPR018202 GO:0004185
Viun11g00755 500 Pfam Serine carboxypeptidase 72 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00755 Viun-Chr11 10101642 10105317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00755 356 495 Calmodulin-binding Proteins AT2G22960 29.787 2.07e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00755 K16297 - gmx:100799746 654.825