Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00752 ATGGATCTTCAAAATCCTCTGTACTTCTTCTTCTGCCTTCTCCTCACTCTCCTCTCAAGTTCCCAAGCCAAGAAATTCAACGTTGGTGAAAGCCAAGGGTGGGTTCCAAATCCTTCTGAGAGTTACAACAACTGGGCTGAAAGAAACCGATTCCAAATCAATGACACAATAGTGTTCAACTACAAGAAGGGTTCGGATTCGGTGTTGGAAGTGAAGAAGGAAGATTATGATAAGTGCAACACGACCAACCCAATTAAGAAGTTTGAAAACGGTGACACTGAGTTCAAGTTTGATCGATCAGGACCATTTTACTTCATTAGTGGAAAAGATGGAAACTGTGAAAAGGGTCAGAAATTAATTGTTGTTGTTTTGTCCCCGAGAAAATCACCATCACCTTCATCATCGCCATTGTTGCCACCAAAATATTTGCCTTCACCCTCACCGAAGCCTAACCCACCAACCGTTTCGCCGTCCTCTCCGCCGTCCCCTCCGCCGCCCCCAGCGGTTCAACCTCCGTCAAGCTCAATATCTCCGAAACCGGCCAGAGGGCCTTCGGCGGCAGCTCCGGGACCTGAAAACTGGCATCCTGCGAGTGCTCCGGCGCCTCAAACCATGTATCCGGTGACTTCTCCTCCGGCACCGCCACCGGAGACGGGGACTCCACCGCCGTATCTGGGGCCAGCTTCTTCACCGCAGTCTCCGGAGGGGCCAACTTCTCCGCCGCAGTCGCCGGCGGGGCCAACTTCACCACCGCAGTCGCAGCCGTCTAATTCAACGGCGCCGTCACCGACGAGTGGTGGTTTTGCTGTGGCTCCTTCAAACGCTTTGGTGTATTTCGTAACAATTGTAGTTGGTGCGGCTTTGTTGCGTTACTGA 876 0.5194 MDLQNPLYFFFCLLLTLLSSSQAKKFNVGESQGWVPNPSESYNNWAERNRFQINDTIVFNYKKGSDSVLEVKKEDYDKCNTTNPIKKFENGDTEFKFDRSGPFYFISGKDGNCEKGQKLIVVVLSPRKSPSPSSSPLLPPKYLPSPSPKPNPPTVSPSSPPSPPPPPAVQPPSSSISPKPARGPSAAAPGPENWHPASAPAPQTMYPVTSPPAPPPETGTPPPYLGPASSPQSPEGPTSPPQSPAGPTSPPQSQPSNSTAPSPTSGGFAVAPSNALVYFVTIVVGAALLRY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00752 291 PANTHER BLUE COPPER PROTEIN 25 173 IPR039391 GO:0009055
Viun11g00752 291 MobiDBLite consensus disorder prediction 132 178 - -
Viun11g00752 291 Gene3D - 22 128 IPR008972 -
Viun11g00752 291 CDD OsENODL1_like 24 123 IPR041846 -
Viun11g00752 291 PRINTS Proline rich extensin signature 208 224 - -
Viun11g00752 291 PRINTS Proline rich extensin signature 184 205 - -
Viun11g00752 291 PRINTS Proline rich extensin signature 169 181 - -
Viun11g00752 291 PRINTS Proline rich extensin signature 145 161 - -
Viun11g00752 291 PRINTS Proline rich extensin signature 124 136 - -
Viun11g00752 291 FunFam Early nodulin-like protein 1 23 128 - -
Viun11g00752 291 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Viun11g00752 291 MobiDBLite consensus disorder prediction 126 270 - -
Viun11g00752 291 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Viun11g00752 291 MobiDBLite consensus disorder prediction 205 257 - -
Viun11g00752 291 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00752 Viun-Chr11 9997240 9998454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00752 3 187 Phytocyanin Superfamily AT5G53870 51.010 2.61e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00752 - - vra:106755782 328.176