Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00707 ATGGCGAAAACGAGGCCAGGCAGAAAGGACTTGGACTCGTACACCATAAGAGGAACCAACAAGGTCGTCCGAGCCGGTGATTGCGTTCTGATGCGGCCATCGGACACGTCCAAGCCCCCTTACGTGGCGCGCGTGGAGAAGATCGAGCAGGACAACAGGAACAACGTGAAGGTGCGTGTGAGGTGGTACTACAGACCCGAAGAGTCCATTGGGGGTCGCAGACAGTTCCATGGTGCCAAAGAGCTTTTTCTCTCCGACCACTATGATGTGCAGAGTGCGCACACCATCGAAGGCAAATGCGTAGTACACTCTTTCAAGAACTACACCAAGCTCGAGAATGTGGGTGCTGAGGATTACTATTGTAGATTTGAGTACAAGGCTGCCACTGGGGCTTTCACTCCTGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCATATAACCCGGATGACCTCATGGTACAATGTGAAGGGTGCAAGGATTGGAATCATCAATTATGTGATCTCACCACCTGCAGAATGAGTGGCCTAAAGGGTGTTAGAAAGTTGTAA 552 0.5109 MAKTRPGRKDLDSYTIRGTNKVVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWNHQLCDLTTCRMSGLKGVRKL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00707 183 PANTHER OS08G0421900 PROTEIN 1 167 - -
Viun11g00707 183 Gene3D - 2 134 IPR043151 -
Viun11g00707 183 Pfam BAH domain 23 135 IPR001025 GO:0003682
Viun11g00707 183 SUPERFAMILY FYVE/PHD zinc finger 132 168 IPR011011 -
Viun11g00707 183 SMART BAH_4 21 136 IPR001025 GO:0003682
Viun11g00707 183 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Viun11g00707 183 FunFam Chromatin remodeling protein EBS 1 132 - -
Viun11g00707 183 CDD BAH_BAHCC1 22 156 - -
Viun11g00707 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 175 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00707 Viun-Chr11 8884200 8886651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00707 31 132 Core DNA Replication Machinery Family AT4G14700 29.126 3.16e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00707 K25868 - gmx:100800993 351.673