Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00703 ATGGGGGAATCACAGAACCACCATCTCCTTCACCAAGCACCAGCACCGTCGAGATCGGCCATGAGAGCCGCCGGCGGCGGCGGCGGCGAGATCGTGGAGGTGCAAGGCGGCCACATTGTCCGCTCCACCGGCCGGAAGGACCGTCACAGCAAGGTCTGCACTGCCAAAGGCCCCAGAGACCGCCGTGTGCGCCTGGCGGCGCACACCGCCATCCAATTCTACGACGTCCAGGACCGCCTCGGCTATGACCGCCCCAGCAAGGCGGTGGACTGGCTCATAAAAAAAGCCAAGACCGCCATCGACGAGCTTGCGGAGCTCCCGCCATGGAACCCCACGGCCACGTCAATGCAACCGCCGCAGCAGCAGGAAATCGTCCTCCGCCAGAACAAGTCTCTCGCTGTAGAACAAGACCCGACAGCGTTCGGCAGCCGTGGCGAGAGCAACGTTGTCGTCGCCCCTACCAGAGTTCCGGAACAATTCTCTCACCAACAGTTGGAGAGTGAAAATGCTAACATGGGCAACGGCAAGTACAACAGTGGTCCTGGTTTTCTGCCACCGTCTTTGGATACCGATAACATTGCCGAGACAATCAAAACTTTCTTTCCCGTCGAAGCTACCACGACGTCGTATCAGAGTTACCCTCCGGCGCCGCCGGATTTGAGGCAGCAAGATCTGCGTTTGTCGTTGCAGTCCTTTCAGGACCCTATCATGCTTCAGCACCAGCCTCAGAGCCACAACGAGCCGGTGCTATTCGCCGGAACGGCGCTCGGCTTCGATGGCGGTTCCGCCTGGTCGGAGCATCAGCACCACCACTCGGAGGAGCAAAGGTTGCTCTTTGGTGGCAACAGTGGCCATGGCGGTGGGTTTGTGTTCAACACGCCGGCACCGGCGTTTGGCCAATTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGGTTCGTGCTTGGATAGACCCTTCGGTCGATCACCACCATCACAACCATCACTACCTCTCGCCGATGATCCACCAGGGCTCCGTCGCCGGCGGCTTCTCCAACGGCGGTGGATTCCCTGGCTTTCGCATTCCAGCACGAATTCAGGGTGAAGAGGAGCACGACGGCGTATCCGACAGGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1155 0.5965 MGESQNHHLLHQAPAPSRSAMRAAGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDELAELPPWNPTATSMQPPQQQEIVLRQNKSLAVEQDPTAFGSRGESNVVVAPTRVPEQFSHQQLESENANMGNGKYNSGPGFLPPSLDTDNIAETIKTFFPVEATTTSYQSYPPAPPDLRQQDLRLSLQSFQDPIMLQHQPQSHNEPVLFAGTALGFDGGSAWSEHQHHHSEEQRLLFGGNSGHGGGFVFNTPAPAFGQFFSQRGPLQSSNTPSVRAWIDPSVDHHHHNHHYLSPMIHQGSVAGGFSNGGGFPGFRIPARIQGEEEHDGVSDRPSSASSDSRH 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00703 384 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 309 IPR005333 GO:0003700
Viun11g00703 384 Pfam TCP family transcription factor 44 158 IPR017887 -
Viun11g00703 384 MobiDBLite consensus disorder prediction 1 28 - -
Viun11g00703 384 MobiDBLite consensus disorder prediction 361 384 - -
Viun11g00703 384 ProSiteProfiles TCP domain profile. 45 103 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00703 Viun-Chr11 8764409 8767127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00703 6 384 TCP Transcription Factor Family AT1G53230 49.880 1.36e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun11g00703 TCP 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00703 - - gmx:100800275 538.11