Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00686 ATGGCATTAACTTCCTCTACTCTGGCATCCTTGACATCATTCCTTTGCCTGTGTACGTTTTGTGTTAATGCAGTCATCCACAGACAAATTTTGAAAACAGGAGAATCACTGCGAACCTCAGACTCAGTTGTGTCCGGTAACGGGAAGTTCGAACTGTGCTTTTTCGGCAGAGTTAGAGATAACTCATTCAGAGATAACTCAACCAAGTACTACGTTGGTATACGGTATAAAAGGGTTCTAAACGACAAGAAGAAGATTGTTTGGGTTGCTAACCGAGACTACGCATTTGAAACATCCTCAGCAGTTCTTACCTTTCATATTGATGGAAGTTTTGTGATCAAGGATGGACGAGGTATATACTTTCTCAGCAAGCTTTCAAACAATTTCAAGACCTATGGCATGCTCTTGGATTCAGGAAACTTGATACTGCTGAAAACCTCAAATAATGAGATTTTGTGGCAGAGTTTTGATCATCCCACGGACACCCTTTTACCCGGAATGAAACTAGGATATTATGAAGGAAACATTTGGTCATTGCGATCATGGACAAGTGCAGATGACCCTGCCCCTGGAGCTTTTTCCCTCCAGTATGATTACGGCAAGGCGAACCTAATCATCAACAATGGTTCTAATGTGTTCTGGATTGACGACAGCTACAACGATACTATTGGCAATGTTATTAGACAAAGTGATTTGAATAAGTCACATCCGACGAACGACAGTTATTTCGCTTTGCGAGTTGGTAGTGACTCTAGGTTGGTACTAGAAGTGTCTGGGGAGCTCAATCTGGAGTATTGGTCTGATAAAGAACAACGTTGGGTTTCTAATTCATCCAAGTGTGGAACTAACAATTGGTGTGGAGCCTTTTCCATCTGTAACCCGGAAGCTCTTGACCCTTGTGACTGTCTTAATGGTTTCAGGCCCTTTGATGCTGATTCTTGGAGTAAAGGGGACAAATCCGCTGGCTGTGTAAGGAAAAAAGAGTTATCGTTCTGCAGTAACGGTGTTGAATCCAACGATACATTCAACCAACTCTATGATGTGAACTCAGTATCAGCTTCGAACTGGACGATAAAGATCGGTACAGCAAGAGAGTGTGAAAGAACTTGTTCTAAGAATTGTTCTTGTGTTGCTTTTTCATACTATGCGAACGGTAACTGCCAGTTGTGGTTTGGTTCATTATTGAATCTAAAGAACGTCTCAACAGAAGTGATAAGTTTTGATAATAGCAATCCAATTATTTTCCTAAGAGTTGCTGCCTCAGAATTGGATACTTCTGATTCGAACACAACAAGAGCAAAAGAAGGAGGATATACTGTTAGCAAGAATCTACTTCTGATTGTTATACTCATCTCTTCTCTAGCTTTTCTTGTAGTGGGCCTTTTAGTTTACTGGATTAGAAACAAGAGGAGAAAAGGGGAAGATTTGCTCCATTTTGATATAAGCATGAGCATGAAAGTTGAAGATTCTGAACTTACTGAATCAGATAGGAGTGCCAAAGTGAAGAAGGAAGTCAAATTGCCTTTATTCAGTTTCGAGAGTGTTGCAGCTGCAACTAATAATTTCTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCCGTTTACAAGGGTACATTATTTAATGGGGATGAGGTTGCCGTGAAAAGACTGTCACGGAGATCTGGTCAAGGATGGGAAGAGTTAAGAAATGAAGCTTTGTTGATTGCAAAACTCCAACACAACAATCTTGTTAGACTTCTTGGTTGCTGCATTGATCGAAATGAAAAAATGCTGATTTATGAGTTTATGCCTAATAAAAGCTTGGATCTTTTCCTTTTTGATGCAACGAAGAAACGGATGCTAGATTGGGGAACAAGAGTAAGAATAATTGATGGAATTGCCCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATCATTCACCGAGATCTAAAAGCCAGCAACATATTGTTGGACAGCAATATGAATCCCAAAATATCAGATTTTGGAATAGCAAAAATATTTGGTGATAATGAACTTGAAGCAAATACAAACCGAATAGTTGGAACATATGGTTACATGGCTCCTGAATATGCATTAGAAGGACTTTTCTCAGTAAAATCAGACGTGTTTAGTTTTGGGGTCCTTCTGTTGGAGATTATAAGTGGCAAGAAGAATATTGGCTTTTATCAAACGAGTTCCTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACCAGAAATTCAGGAGTGGATCTGATGGATAGTGCATTAGATGAGAGTGATACTTTATGTAATGTGTCAAGATATGTGAACATAGGACTTCTTTGCGTTCAAGAAAGTCCAGAAGATAGGCCAACCATGTCTGACGTTGCATCAATGATTGGGAATGACACTGTGCCCCTTCCTTCTCCTAAACCACCTGCATTTCAAAAGCTCAGAGGTGATGATAGTTCAACATTGCCCTCCACCTCCACAGAAAGACTTTCAGTTAATGTTATCACAGAAACAATTGTGGAAGCAAGATGA 2520 0.3992 MALTSSTLASLTSFLCLCTFCVNAVIHRQILKTGESLRTSDSVVSGNGKFELCFFGRVRDNSFRDNSTKYYVGIRYKRVLNDKKKIVWVANRDYAFETSSAVLTFHIDGSFVIKDGRGIYFLSKLSNNFKTYGMLLDSGNLILLKTSNNEILWQSFDHPTDTLLPGMKLGYYEGNIWSLRSWTSADDPAPGAFSLQYDYGKANLIINNGSNVFWIDDSYNDTIGNVIRQSDLNKSHPTNDSYFALRVGSDSRLVLEVSGELNLEYWSDKEQRWVSNSSKCGTNNWCGAFSICNPEALDPCDCLNGFRPFDADSWSKGDKSAGCVRKKELSFCSNGVESNDTFNQLYDVNSVSASNWTIKIGTARECERTCSKNCSCVAFSYYANGNCQLWFGSLLNLKNVSTEVISFDNSNPIIFLRVAASELDTSDSNTTRAKEGGYTVSKNLLLIVILISSLAFLVVGLLVYWIRNKRRKGEDLLHFDISMSMKVEDSELTESDRSAKVKKEVKLPLFSFESVAAATNNFSDANKLGEGGFGPVYKGTLFNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEFMPNKSLDLFLFDATKKRMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDSNMNPKISDFGIAKIFGDNELEANTNRIVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGKKNIGFYQTSSFNLLGYAWDLWTRNSGVDLMDSALDESDTLCNVSRYVNIGLLCVQESPEDRPTMSDVASMIGNDTVPLPSPKPPAFQKLRGDDSSTLPSTSTERLSVNVITETIVEAR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00686 839 Gene3D - 24 157 IPR036426 -
Viun11g00686 839 ProSiteProfiles Protein kinase domain profile. 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00686 839 SMART ntp_6 338 410 IPR003609 -
Viun11g00686 839 Pfam Domain of unknown function (DUF3403) 794 839 IPR021820 GO:0004674
Viun11g00686 839 SMART blect_4 34 159 IPR001480 -
Viun11g00686 839 PIRSF SRK 1 839 IPR024171 GO:0004674
Viun11g00686 839 Gene3D Transferase(Phosphotransferase) domain 1 598 797 - -
Viun11g00686 839 CDD PAN_AP_plant 332 419 - -
Viun11g00686 839 SMART serkin_6 522 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00686 839 ProSiteProfiles PAN/Apple domain profile. 332 419 IPR003609 -
Viun11g00686 839 Pfam Protein tyrosine and serine/threonine kinase 526 790 IPR001245 GO:0004672|GO:0006468
Viun11g00686 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 800 - -
Viun11g00686 839 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Viun11g00686 839 SUPERFAMILY Protein kinase-like (PK-like) 506 818 IPR011009 -
Viun11g00686 839 MobiDBLite consensus disorder prediction 801 823 - -
Viun11g00686 839 FunFam Uncharacterized protein 497 597 - -
Viun11g00686 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Viun11g00686 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 123 814 - -
Viun11g00686 839 Pfam D-mannose binding lectin 86 182 IPR001480 -
Viun11g00686 839 CDD STKc_IRAK 528 792 - -
Viun11g00686 839 CDD B_lectin 28 159 IPR001480 -
Viun11g00686 839 ProSiteProfiles Bulb-type lectin domain profile. 28 156 IPR001480 -
Viun11g00686 839 Pfam PAN-like domain 336 396 IPR003609 -
Viun11g00686 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 188 IPR036426 -
Viun11g00686 839 Pfam S-locus glycoprotein domain 240 308 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00686 Viun-Chr11 8561555 8565348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00686 420 807 Receptor kinase-like Gene Family AT4G23190 49.490 8.76e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00686 PK_Tyr_Ser-Thr 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00686 - - gmx:100811148 1146.34