Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00685 ATGGCATTAACTTCCTCTACTCTGGCATCCTTGACATCATTCCTTTGCCTGTGTACGTTTTGTGTTAATGCAGTCATCCACAGACAAATTTTGAAAACAGGAGAATCACTGCGAACCTCAGACTCAGTTGTGTCCGGTAACGGGAAGTTCGAACTGTGCTTTTTCGGCAGAGTTAGAGATAACTCATTCAGAGATAACTCAACCAAGTACTACGTTGGTATACGGTATAAAAGGGTTCTAAACGACAAGAAGAAGATTGTTTGGGTTGCTAACCGAGACTACGCATTTGAAACATCCTCAGCAGTTCTTACCTTTCATATTGATGGAAGTTTTGTGATCAAGGATGGACGAGGTATATACTTTCTCAGCAAGCTTTCAAACAATTTCAAGACCTATGGCATGCTCTTGGATTCAGGAAACTTGATACTGCTGAAAACCTCAAATAATGAGATTTTGTGGCAGAGTTTTGATCATCCCACGGACACCCTTTTACCCGGAATGAAACTAGGATATTATGAAGGAAACATTTGGTCATTGCGATCATGGACAAGTGCAGATGACCCTGCCCCTGGAGCTTTTTCCCTCCAGTATGATTACGGCAAGGCGAACCTAATCATCAACAATGGTTCTAATGTGTTCTGGATTGACGACAGCTACAACGATACTATTGGCAATGTTATTAGACAAAGTGATTTGAATAAGTCACATCCGACGAACGACAGTTATTTCGCTTTGCGAGTTGGTAGTGACTCTAGGTTGGTACTAGAAGTGTCTGGGGAGCTCAATCTGGAGTATTGGTCTGATAAAGAACAACGTTGGGTTTCTAATTCATCCAAGTGTGGAACTAACAATTGGTGTGGAGCCTTTTCCATCTGTAACCCGGAAGCTCTTGACCCTTGTGACTGTCTTAATGGTTTCAGGCCCTTTGATGCTGATTCTTGGAGTAAAGGGGACAAATCCGCTGGCTGTGTAAGGAAAAAAGAGTTATCGTTCTGCAGTAACGGTGTTGAATCCAACGATACATTCAACCAACTCTATGATGTGAACTCAGTATCAGCTTCGAACTGGACGATAAAGATCGGTACAGCAAGAGAGTGTGAAAGAACTTGTTCTAAGAATTGTTCTTGTGTTGCTTTTTCATACTATGCGAACGGTAACTGCCAGTTGTGGTTTGGTTCATTATTGAATCTAAAGAACGTCTCAACAGAAGTGATAAGTTTTGATAATAGCAATCCAATTATTTTCCTAAGAGTTGCTGCCTCAGAATTGGATACTTCTGATTCGAACACAACAAGAGCAAAAGAAGGAGGATATACTGTTAGCAAGAATCTACTTCTGATTGTTATACTCATCTCTTCTCTAGCTTTTCTTGTAGTGGGCCTTTTAGTTTACTGGATTAGAAACAAGAGGAGAAAAGGGGAAGATTTGCTCCATTTTGATATAAGCATGAGCATGAAAGTTGAAGATTCTGAACTTACTGAATCAGATAGGAGTGCCAAAGTGAAGAAGGAAGTCAAATTGCCTTTATTCAGTTTCGAGAGTGTTGCAGCTGCAACTAATAATTTCTCAGATGCAAATAAACTTGATGCAACGAAGAAACGGATGCTAGATTGGGGAACAAGAGTAAGAATAATTGATGGAATTGCCCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATCATTCACCGAGATCTAAAAGCCAGCAACATATTGTTGGACAGCAATATGAATCCCAAAATATCAGATTTTGGAATAGCAAAAATATTTGGTGATAATGAACTTGAAGCAAATACAAACCGAATAGTTGGAACATATGGTTACATGGCTCCTGAATATGCATTAGAAGGACTTTTCTCAGTAAAATCAGACGTGTTTAGTTTTGGGGTCCTTCTGTTGGAGATTATAAGTGGCAAGAAGAATATTGGCTTTTATCAAACGAGTTCCTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACCAGAAATTCAGGAGTGGATCTGATGGATAGTGCATTAGATGAGAGTGATACTTTATGTAATGTGTCAAGATATGTGAACATAGGACTTCTTTGCGTTCAAGAAAGTCCAGAAGATAGGCCAACCATGTCTGACGTTGCATCAATGATTGGGAATGACACTGTGCCCCTTCCTTCTCCTAAACCACCTGCATTTCAAAAGCTCAGAGGTGATGATAGTTCAACATTGCCCTCCACCTCCACAGAAAGACTTTCAGTTAATGTTATCACAGAAACAATTGTGGAAGCAAGATGA 2280 0.3996 MALTSSTLASLTSFLCLCTFCVNAVIHRQILKTGESLRTSDSVVSGNGKFELCFFGRVRDNSFRDNSTKYYVGIRYKRVLNDKKKIVWVANRDYAFETSSAVLTFHIDGSFVIKDGRGIYFLSKLSNNFKTYGMLLDSGNLILLKTSNNEILWQSFDHPTDTLLPGMKLGYYEGNIWSLRSWTSADDPAPGAFSLQYDYGKANLIINNGSNVFWIDDSYNDTIGNVIRQSDLNKSHPTNDSYFALRVGSDSRLVLEVSGELNLEYWSDKEQRWVSNSSKCGTNNWCGAFSICNPEALDPCDCLNGFRPFDADSWSKGDKSAGCVRKKELSFCSNGVESNDTFNQLYDVNSVSASNWTIKIGTARECERTCSKNCSCVAFSYYANGNCQLWFGSLLNLKNVSTEVISFDNSNPIIFLRVAASELDTSDSNTTRAKEGGYTVSKNLLLIVILISSLAFLVVGLLVYWIRNKRRKGEDLLHFDISMSMKVEDSELTESDRSAKVKKEVKLPLFSFESVAAATNNFSDANKLDATKKRMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDSNMNPKISDFGIAKIFGDNELEANTNRIVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGKKNIGFYQTSSFNLLGYAWDLWTRNSGVDLMDSALDESDTLCNVSRYVNIGLLCVQESPEDRPTMSDVASMIGNDTVPLPSPKPPAFQKLRGDDSSTLPSTSTERLSVNVITETIVEAR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00685 759 SUPERFAMILY Protein kinase-like (PK-like) 531 738 IPR011009 -
Viun11g00685 759 PIRSF SRK 1 530 IPR024171 GO:0004674
Viun11g00685 759 PIRSF SRK 528 759 IPR024171 GO:0004674
Viun11g00685 759 ProSiteProfiles Protein kinase domain profile. 331 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00685 759 Pfam D-mannose binding lectin 86 182 IPR001480 -
Viun11g00685 759 SMART ntp_6 338 410 IPR003609 -
Viun11g00685 759 SMART blect_4 34 159 IPR001480 -
Viun11g00685 759 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 130 528 - -
Viun11g00685 759 CDD PAN_AP_plant 332 419 - -
Viun11g00685 759 Pfam PAN-like domain 336 396 IPR003609 -
Viun11g00685 759 ProSiteProfiles PAN/Apple domain profile. 332 419 IPR003609 -
Viun11g00685 759 Pfam Protein tyrosine and serine/threonine kinase 527 710 IPR001245 GO:0004672|GO:0006468
Viun11g00685 759 MobiDBLite consensus disorder prediction 721 743 - -
Viun11g00685 759 CDD B_lectin 28 159 IPR001480 -
Viun11g00685 759 ProSiteProfiles Bulb-type lectin domain profile. 28 156 IPR001480 -
Viun11g00685 759 Gene3D - 24 157 IPR036426 -
Viun11g00685 759 Pfam S-locus glycoprotein domain 240 308 IPR000858 GO:0048544
Viun11g00685 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Viun11g00685 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 518 720 - -
Viun11g00685 759 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 188 IPR036426 -
Viun11g00685 759 SMART serkin_6 456 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00685 759 Gene3D Transferase(Phosphotransferase) domain 1 525 717 - -
Viun11g00685 759 Pfam Domain of unknown function (DUF3403) 714 759 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00685 Viun-Chr11 8561553 8565351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00685 501 727 Receptor kinase-like Gene Family AT4G23250 53.275 2.66e-71 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00685 PK_Tyr_Ser-Thr 3.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00685 - - pvu:PHAVU_011G149500g 1003.82