Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00679 ATGCCCATTTGTGCCATCACAATGTTATCTATTTGGTTGTTCTTATTCTCATACATGTCTACGACTTCTTCTTCCTTAGACAGTTTAGCAGTGAGTGAATCCATCCAAGATATTAAGAACGTGACTTTGGTTTCAGCAGGTGGAATTACTGAACTGGGTTTCTTCAGTCCACGAAATTCAGCAAGAAGATATTTGGGAATATGGTACACAAATGTATCCCCTTTCACTGTGGTATGGGTGGCAAACCGAAATAAACCTCTTGAGAATAACTCAGGAGTTCTCAAACTCAACCAAAAAGGGGTTCTTGAGCTGCTCAATGCCACAAACAACATCATTTGGTCATCACCCAACACAGCAAGCAATACAGTGAATGATCCAATAGCTCGTCTTTTGGATTCTGGAAATTTTGTAGTGAGAAATGGAGGGGAAACAAAGGAGGATAGCATCTTGTGGCAGAGTTTTGATCATCCGGGTGATACACAGATGCCAGAAATGAAGCTTGGATGGAACCTAGAGACTGGTGTGGAAAGATATATAGCATCTTGGAAAAGTGATGAGGATCCTGCAGAGGGAGAATATGTTGTAAAAGTGGATCTTAGAGGATATCCTCAAATATCGAAGTTCAAGGGAACTGATATAAAAGCAAGAGCAGGGTCATGGAATGGCTTATCTCTGGTTGGAAATCCTATTCCAGCTCGTGGTACGTCTGCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTATTGGTACAGTCTTAGTGATGAATTGGACTTCTTTGTGTATACACTGACCCCTTCAGGCACGGGACAAAGTTGGTTTTGGACAACTGAAACAAGGACACGGCAAGTGGTTTCAAGTGGGGAGGAAGATCAATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTGTATGCATTTATGATGGTAACTTTCCAGTTTGTGAATGCCTAAGAGGGTATGTTCCTAACTCTCCTGATGAGTGGAATATATCAATTTGGCACAATGGCTGTGTGCCAAGGAATAAATCTAACTGTACGAACATAAACACAGATGGCTTCTTGAAATACATGCACATGAAGTTGCCAGACACTTCTTCATCATGGTTTAATGCAACCATGAACCTTGATGAATGCATGAAGTTGTGCATTCAAAACTGTTCTTGTACAGCATGTGCAAATTTAGATGTCAGTGATGAAGGAAGTGGTTGTCTGCTGTGGTTTAATGATTTGGTTGACATGAGGAATTTCTCTCAATGGGGACAAGACTTTTACATCAGAGTCCCTGCTTCCGAATTAGATCATGCTGGCCATGGAAACATCACCATAAAGATAGCAGCAATTACTATTGGTGTGATTATTTTCGGATTAGTCACATGTGCATGCATAATTATAAGAAAAAATCCAGGGATAGCTAGAAAAATTTACAGCAAGCATTACAAAATTAAGCAGAAAAAGGAAGAGCTTGAATTTGCAACTTTTAATTTTCCGGTCATTGCTAATGCTACTGAAAACTTTTCAACCAAAAACAAGCTTGGTGAAGGTGGCTTTGGACCAGTATACAAGGGCATACTGATAGATGGACAAGAGTTGGCAGTGAAAAGACTCTCAGAGAATTCTGGACAAGGGTTAGAAGAGTTCAAAAATGAAGTAGCGTTGATTGCAAAACTTCAGCACCGTAATCTTGTAAAGCTCCTGGGTTGTTGCATTGAAGGAGAAGAAAAAATGCTAATTTATGAATACATGCCAAACAAAAGCTTGGACTTCTTTGTTTTTGATGAAACCAAAAGGAAGTTGCTAGATTGGCGCATGAGATTCAACATTATCAGTGGCATTGCTCGAGGACTTCTCTATCTTCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTTAAAACCAGCAATATTTTACTAGACACAAATTTGGATCCCAAAATAGCAGATTTTGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGGAAAGACACATAGGGTGGCTGGAACATATGGATACATGCCTCCTGAGTATGCTGCACGTGGACATTTTTCAGTAAAATCAGATGTGTTTAGTTATGGTGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACAGGGAATTTTCAGACCCAGAAAACAACAATAATCTTCTTGGCCATGCATGGAGATTGTGGACTGAAGAGAGGGCACTCCAACTGCTTGATGAATTGATAGAAGAACAATGCCTAGAGTCTGAAGTCACACGATGCATACAGGTGGGGCTATTATGTGTGCAACAAAGACCAAACGATAGACCAGACATGTCATCAGTGGTTCTAATGTTGAATGGTGAAAAATCATTACCAAAGCCAAAGGTTCCTGGCTTTTACACAGAATCAGATGTTACAACCAAAACAAATTCTTCATCAGAAAATCACACACTATGCTCAGTTAATGAACTTTCCATCACAATGATAGATGCAAGATAG 2469 0.3961 MPICAITMLSIWLFLFSYMSTTSSSLDSLAVSESIQDIKNVTLVSAGGITELGFFSPRNSARRYLGIWYTNVSPFTVVWVANRNKPLENNSGVLKLNQKGVLELLNATNNIIWSSPNTASNTVNDPIARLLDSGNFVVRNGGETKEDSILWQSFDHPGDTQMPEMKLGWNLETGVERYIASWKSDEDPAEGEYVVKVDLRGYPQISKFKGTDIKARAGSWNGLSLVGNPIPARGTSAKFVFNEKEVYYWYSLSDELDFFVYTLTPSGTGQSWFWTTETRTRQVVSSGEEDQCENYAFCGANSVCIYDGNFPVCECLRGYVPNSPDEWNISIWHNGCVPRNKSNCTNINTDGFLKYMHMKLPDTSSSWFNATMNLDECMKLCIQNCSCTACANLDVSDEGSGCLLWFNDLVDMRNFSQWGQDFYIRVPASELDHAGHGNITIKIAAITIGVIIFGLVTCACIIIRKNPGIARKIYSKHYKIKQKKEELEFATFNFPVIANATENFSTKNKLGEGGFGPVYKGILIDGQELAVKRLSENSGQGLEEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDFFVFDETKRKLLDWRMRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDTNLDPKIADFGLARSFLGDQVEGKTHRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVSGKKNREFSDPENNNNLLGHAWRLWTEERALQLLDELIEEQCLESEVTRCIQVGLLCVQQRPNDRPDMSSVVLMLNGEKSLPKPKVPGFYTESDVTTKTNSSSENHTLCSVNELSITMIDAR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00679 822 Gene3D - 21 154 IPR036426 -
Viun11g00679 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 154 - -
Viun11g00679 822 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00679 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 579 - -
Viun11g00679 822 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Viun11g00679 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 188 IPR036426 -
Viun11g00679 822 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Viun11g00679 822 ProSiteProfiles EGF-like domain profile. 288 325 IPR000742 -
Viun11g00679 822 Pfam S-locus glycoprotein domain 216 322 IPR000858 GO:0048544
Viun11g00679 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 426 - -
Viun11g00679 822 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Viun11g00679 822 Pfam Domain of unknown function (DUF3403) 780 822 IPR021820 GO:0004674
Viun11g00679 822 PIRSF SRK 1 822 IPR024171 GO:0004674
Viun11g00679 822 SMART blect_4 34 157 IPR001480 -
Viun11g00679 822 SMART ntp_6 347 426 IPR003609 -
Viun11g00679 822 Gene3D Transferase(Phosphotransferase) domain 1 580 785 - -
Viun11g00679 822 SMART serkin_6 504 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00679 822 CDD PAN_AP_plant 341 427 - -
Viun11g00679 822 SUPERFAMILY Protein kinase-like (PK-like) 488 787 IPR011009 -
Viun11g00679 822 Gene3D Hepatocyte Growth Factor 343 423 - -
Viun11g00679 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Viun11g00679 822 CDD STKc_IRAK 510 777 - -
Viun11g00679 822 CDD B_lectin 40 157 IPR001480 -
Viun11g00679 822 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Viun11g00679 822 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 763 - -
Viun11g00679 822 Pfam D-mannose binding lectin 76 183 IPR001480 -
Viun11g00679 822 Pfam PAN-like domain 347 412 IPR003609 -
Viun11g00679 822 FunFam - 580 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00679 Viun-Chr11 8159209 8162549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00679 492 790 Receptor kinase-like Gene Family AT4G11480 59.801 7.16e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00679 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00679 - - gmx:100815430 1291.95