Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00670 ATGGCAGCAACATTAATGGCAGCCTCAGCAAGCACCGGCACTGTCCTTAAACCAACACCTTTCCTTGGCCAAAGTAGAGCAACCAATGCCAACCCTCTTAGAGATTTTGTCTCCATGGGACATGGGAAATACACCATGGGAAATGAACTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACTCCTTCATATTTGACAGGAGAATTCCCAGGGGACTATGGATGGGACACTGCTGGATTGTCTGCTGATCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTAGGATGCATCACTCCAGAAGTGCTTGAGAAGTGGGTGAGAGTGGATTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCACAAATATTCTCAGAAGGAGGCCTAGACTATCTGGGGAACCCTAACCTTGTGCATGCACAGAGCATTTTGGCAGTGCTAGGGTTCCAAGTTGTGCTGATGGGTCTTGTTGAAGGGTTTCGCATCAATGGGCTTCCTGGTGTGGGAGAGGGCAATGATCTGTACCCTGGTGGCCAATACTTTGACCCTCTTGGACTTGCTGATGATCCTGTGGCTTTTGCTGAGCTTAAGGTTAAGGAGATAAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGGTTCTTTGTGCAAGCCATTGTCACTGGGAAAGGACCTCTTGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTGCCTGGCTCTTAG 810 0.4914 MAATLMAASASTGTVLKPTPFLGQSRATNANPLRDFVSMGHGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00670 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Viun11g00670 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 20 268 IPR001344 GO:0009765|GO:0016020
Viun11g00670 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Viun11g00670 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Viun11g00670 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00670 Viun-Chr11 8079475 8081316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00670 14 268 Chloroplast and Mitochondria Gene Families AT2G05070 68.914 2.72e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00670 K08914 - cave:132175650 529.25