Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00667 ATGACCGGCAAAGAAATCCTTCATAAGATGAAGGAAAAAGTTCTGGGGCCATCTGATACTGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCACATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCTGGTCATGCCATGGAAGACTATGTTGTTGCTCAGTTTAAGCAAGTTGATAACAATGAATTGGGCTTATTTGCTATATTCGATGGCCACTCAGGTCAAAGTGTGCCTGATTACTTGAAAAGTCATTTGTTTGATATCATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGATGCTGTGAAGAAAGCATATGGTATAACTGATTCTACTATTTTAGACAAATCAGGTGAACTGGGTAGAGGGGGTTCAACTGCAGTTACTGCAATATTGATCAACTGCCAGAAGTTAGTAGTGGCCAATATTGGGGATTCCAGGGCTGTCTTGTGCAAGAATGGCCAGGCCAAACAACTATCAGTGGATCATGAACCAAGTGTAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTCCCACGAGTTGATGGTCAGTTGGCAGTGTCAAGGGCATTCGGAGACAAAAGCCTGAAGGTGCACTTGAGCTCAGAACCACATGTGATGGTGGAGAAGATAGGCGATGATGCAGAGTTTGTTATCTTAGCCAGTGATGGGTTATGGAAGGTGATGACAAATCAAGAAGCAGTTGATGCAATCAGAGATGTTAAGGATGCTCGCTCTGCAGCAAAGATCCTTACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCTTGTGTTGTTGTGAAACTTCAGTGA 849 0.4287 MTGKEILHKMKEKVLGPSDTDSGKGKSKMKKHITHGFHLVKGRSGHAMEDYVVAQFKQVDNNELGLFAIFDGHSGQSVPDYLKSHLFDIILKEPNFWTEPADAVKKAYGITDSTILDKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKNGQAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKVHLSSEPHVMVEKIGDDAEFVILASDGLWKVMTNQEAVDAIRDVKDARSAAKILTEEARNRKSSDDISCVVVKLQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00667 282 CDD PP2Cc 35 281 IPR001932 -
Viun11g00667 282 PANTHER PROTEIN PHOSPHATASE 27 280 IPR015655 GO:0004722|GO:0006470
Viun11g00667 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Viun11g00667 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Viun11g00667 282 SMART PP2C_4 24 279 IPR001932 -
Viun11g00667 282 Gene3D - 13 282 IPR036457 -
Viun11g00667 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
Viun11g00667 282 Pfam Protein phosphatase 2C 47 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00667 Viun-Chr11 8030575 8034726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00667 1 282 PP2C-type Phosphatase Gene Family AT3G15260 75.779 1.14e-159 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00667 K17506 - gmx:100787942 516.153