Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00665 ATGGTGGGCTCAGGAACAGCAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCACGAGGCCCTCAGAACTGTGTGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGACCAAGAGTGAGAGGTGGCAATGGGTGCAAAGTTGGGGATGATAATGGAAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCTTTCAGCAAAATGTCGATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTAACGTCTGATAAGTGCCACAAATGGGTCTTCAAAGAGCCTACAGAGTGTGAACCTAATATGACCAACTACTGGCAAAGCTCCTTTGATGCTCTTCCTCCTGAATGGATAGAACAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGCCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTACCAATCAGGATTCTACCTCTCACAACTCTTCTCTTCAACTAGGAGCACTTCCTCTTCTACTTCCCTTCCATCAAAACCATCCACCATTCCAATTAGGCCACCCCCTCCAACCCTCAACTGGGGTCAGAGGCCAATTGGGTCTGCTACTTCTTTGCTACCCTCTGCAACTTTTCAACATGCAGGCAGAATGGGGTTCCCACAGGCCAAAGATGAGACTCAGATGTTCCTCATGCCTCATGCATCATCATCAGAGCATGTGAGAATGGGAGACATGATGGGGGAGCATGAGAGTGACATAAAGTGGCCAAATGGATTATCCATCTTCAATGTACTCACTGGAAGATCTGATGATGCTAAACTCTTGTTCAATCAAGAGAGTGCAAATCCAACCTCAGCAATGCAGAATGCTGGTGTGGCAAACCCAAATGAGTTCTTGAGCTTGGATGGCAACAATGAAGGGACAAGGAAAGTGGACAAGTTCAAGAGGTGCTTCACTCTACCAGCCAAAGTGGTTTCATCTTCATCCTCTACTTCAATGGATCATCACCATCATCAACAAGCAAGTGTGGAGTATAGGAATTCAGGAGGCATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1203 0.4589 MVGSGTATDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNMTNYWQSSFDALPPEWIEQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRSTSSSTSLPSKPSTIPIRPPPPTLNWGQRPIGSATSLLPSATFQHAGRMGFPQAKDETQMFLMPHASSSEHVRMGDMMGEHESDIKWPNGLSIFNVLTGRSDDAKLLFNQESANPTSAMQNAGVANPNEFLSLDGNNEGTRKVDKFKRCFTLPAKVVSSSSSTSMDHHHHQQASVEYRNSGGMYQDVMETFLE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00665 400 PANTHER GB|AAF34833.1 1 400 IPR044170 -
Viun11g00665 400 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 76 IPR025610 -
Viun11g00665 400 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 89 188 IPR025610 -
Viun11g00665 400 MobiDBLite consensus disorder prediction 208 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00665 Viun-Chr11 7980236 7983693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00665 21 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.395 4.04e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00665 - - gmx:100789006 690.649