Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00655 ATGAAACCAAAATCAATGGAGAGTTTTGAAATGCTGGGTGTATACCTTTGCTTCCTCTGTTTTTTATCCATGTCCTCCACTCTGGAGATGATTACTCCGACCCAACCCCTGAGAGATAGTAAGAATGAGAATGAAACTCTTGTCTCAACAAATGGAACCTTTGAAGCAGGATTCTTCAGCCCTGAAATTGATTCCCTTAGGCGTTACCTAGGAATTTGGTACAAAAACATCTCCCCCAGAACGGTTGTTTGGGTGGCCAACAAAGAAAACCCACTTCTAGACCACTCTGGAGTCTTAAAAATTTTTTATGGGGATGTTTATATCACAGACGGCACAGGAGCCATAATATGGTCCCCAAATAACACAGCATACGATTCAGTCGCTATGGAGTTGTTGGAATCAGGAAACATGGTTGCGAAAGATGTTAATAACAAGATTTTATGGCAAAGCTTTGATTACCCTGATGATACTTTACTTCCAGGAATGAAACTTGGAATGGACTTGCGAACTGGTCATCAACGAGCTCTAACATCTTGGAGATCCTACAACGATCCTGCTCCAGGTGAATTTTCATTTAGGGTTCATACTGGTGGCCTTCCTCAAATAGTTATCACAAAGGGTTCTAGTGATGACATAGCTAATAGAGCAGCAGTTTATAGACCAGGGTCTTGGAATGGTCTTAGTCTGAATGGAGGAGTAGCAGGAGAAAGAATTTACCCGTTAATCAAATCCCTTTTTGTTATGAACAAGGATGAAATCTCGTATGAGATTCAAGCCTTGGATAGTTCAACTCTACTGAGAAGCAGATTGCTCCCTGATGGACATCTAATACGATTTATATGGTTAGATGGGTATAAAAGATGGGACACGGTATACGCTGCTTCATTTGATGAGTGCGAGAGATATGATATGTGTGGTGCAAATAGTATTTGCATTGGGAGTGGAGCACATCAACACTGCGAATGCTTAGGTGGATTCCAAACCTACTTTTCAGAATCAACTTGTTATCGAACTACACCTCCAGATTGCAACCAGGGAGATAGTTTTCAGAAGTACGAAGGGGTGAAATTGCCAGACACATCTTCATCTTGGTACAGTGACACAATCAGTGTTGACGAATGCCAGAAATTGTGCTTGACTAACTGCTCTTGTAGTGCATATTCTCATTTGAATACCAGTGCCAACGGAACAGCCTGCGTGTACTGGCTTCATGACATTGTTGACGTCAGGACACTACCAGAGAATGGACATTATTTTTATTTGCGAATTGCACCTTCAAAATTTCAAGGTCACGCCTTCAACATGCAGAAAAGAGATCAAGCCTTCGACAGGAGGAAGATCGGAGGAATTGTAGTAGGCGGTACTATATTCATCATTGTTATTGTAGTATTTGGGTTCATATTTTTTCTCAAGAGGAATAAACTCAAGCAATCAGAAACAAACTATTGGACGGACAAGAACAAGAAAAATGACATTGATTTACCAATGTTCGACTTTTTATCCATCTCCAATGCTACAAATAACTTTTCTGAGAGTAATAAATTGGGACAAGGGGGATTTGGACCAGTGTACAAGGGCATATTATCAGATGGGCAAGAAATTGCAGTTAAGAAGCTTTCAAAAACTTCGCGACAAGGTTTGGACGAGTTCAAAAATGAAGTAATGTTGATTACAAAACTTCAACACTGCAATCTTGTAAAGCTTCTCGGTTGTTCTATTCAGCAAGATGAAAAGATACTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATTTTTGATTCAACAAGAAGTTCATTAATTGGTTGGGCTAAGAGATTTGAAATTGTTGATGGAATTGCCAGAGGACTCCTCTATCTTCACCAAGATTCTAGACTAAAAATCATTCATAGGGATCTCAAGACCGGTAATGTTCTTCTTGATAGTAATATGAAATCAAAAATATCAGATTTTGGTATGGCTAGGACATTTAGCCCGGATCAAGATGAAGCAAACAAAAATAAAGTGATGGGAACATATGGTTATATGTCTCCCGAATATGCTGTACATGGATCATTTTCAATCAAATCAGATATATTCAGTTTTGGGGTGATTGTATTGGAGATAATCAGTGGGAGGAAGAATAGAGGATTTCGTGACCCACACAATGAGCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCCATGGAACTAATGGATGGCTCGGTGAACAGTCAAGTTGAACTATCAAAAATGTTAAGATATATTCATATTGGTTTGTTATGCGTACAACATAGATCAGAGGATAGGCCAACCATGTCTTCCGTAGTTTTAATGTTGAATAGTGAAAATTTATTGCCTGAGCCAAGTCAACCTGGATTTTACCCAGGAACAAATAAGTTGACCATGACAGATTCTTCTCCAAGAAATTATGATGTGTATTCTCTCAACAAAATATCTGAGACATTATTTGAGGCAAGATAG 2484 0.3885 MKPKSMESFEMLGVYLCFLCFLSMSSTLEMITPTQPLRDSKNENETLVSTNGTFEAGFFSPEIDSLRRYLGIWYKNISPRTVVWVANKENPLLDHSGVLKIFYGDVYITDGTGAIIWSPNNTAYDSVAMELLESGNMVAKDVNNKILWQSFDYPDDTLLPGMKLGMDLRTGHQRALTSWRSYNDPAPGEFSFRVHTGGLPQIVITKGSSDDIANRAAVYRPGSWNGLSLNGGVAGERIYPLIKSLFVMNKDEISYEIQALDSSTLLRSRLLPDGHLIRFIWLDGYKRWDTVYAASFDECERYDMCGANSICIGSGAHQHCECLGGFQTYFSESTCYRTTPPDCNQGDSFQKYEGVKLPDTSSSWYSDTISVDECQKLCLTNCSCSAYSHLNTSANGTACVYWLHDIVDVRTLPENGHYFYLRIAPSKFQGHAFNMQKRDQAFDRRKIGGIVVGGTIFIIVIVVFGFIFFLKRNKLKQSETNYWTDKNKKNDIDLPMFDFLSISNATNNFSESNKLGQGGFGPVYKGILSDGQEIAVKKLSKTSRQGLDEFKNEVMLITKLQHCNLVKLLGCSIQQDEKILIYEFMPNRSLDYFIFDSTRSSLIGWAKRFEIVDGIARGLLYLHQDSRLKIIHRDLKTGNVLLDSNMKSKISDFGMARTFSPDQDEANKNKVMGTYGYMSPEYAVHGSFSIKSDIFSFGVIVLEIISGRKNRGFRDPHNELNLLGHAWRLWIEKRPMELMDGSVNSQVELSKMLRYIHIGLLCVQHRSEDRPTMSSVVLMLNSENLLPEPSQPGFYPGTNKLTMTDSSPRNYDVYSLNKISETLFEAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00655 827 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Viun11g00655 827 SUPERFAMILY Protein kinase-like (PK-like) 494 798 IPR011009 -
Viun11g00655 827 SMART ntp_6 344 423 IPR003609 -
Viun11g00655 827 Gene3D Phosphorylase Kinase; domain 1 470 584 - -
Viun11g00655 827 Pfam PAN-like domain 343 409 IPR003609 -
Viun11g00655 827 SMART serkin_6 509 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00655 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Viun11g00655 827 CDD B_lectin 44 154 IPR001480 -
Viun11g00655 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 788 - -
Viun11g00655 827 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Viun11g00655 827 PIRSF SRK 3 827 IPR024171 GO:0004674
Viun11g00655 827 SMART blect_4 38 154 IPR001480 -
Viun11g00655 827 SUPERFAMILY Hairpin loop containing domain-like 347 414 - -
Viun11g00655 827 Gene3D Hepatocyte Growth Factor 342 422 - -
Viun11g00655 827 Pfam Protein tyrosine and serine/threonine kinase 512 778 IPR001245 GO:0004672|GO:0006468
Viun11g00655 827 CDD PAN_AP_plant 339 424 - -
Viun11g00655 827 ProSiteProfiles EGF-like domain profile. 295 332 IPR000742 -
Viun11g00655 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 474 584 - -
Viun11g00655 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 771 - -
Viun11g00655 827 CDD TM_EGFR-like 447 477 - -
Viun11g00655 827 ProSiteProfiles Protein kinase domain profile. 509 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00655 827 Gene3D Transferase(Phosphotransferase) domain 1 585 786 - -
Viun11g00655 827 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Viun11g00655 827 Gene3D - 27 151 IPR036426 -
Viun11g00655 827 Pfam D-mannose binding lectin 81 180 IPR001480 -
Viun11g00655 827 CDD STKc_IRAK 515 781 - -
Viun11g00655 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 185 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00655 Viun-Chr11 7572472 7577057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00655 447 803 Receptor kinase-like Gene Family AT4G23190 50.970 6.27e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00655 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00655 - - vun:114169003 1652.88