Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00654 ATGAAACCAAAATCAATGGAGAGTTTTGAAATGCTGGGTGTATACCTTTGCTTCCTCTGTTTTTTATCCATGTCCTCCACTCTGGAGATGATTACTCCGACCCAACCCCTGAGAGATAGTAAGAATGAGAATGAAACTCTTGTCTCAACAAATGGAACCTTTGAAGCAGGATTCTTCAGCCCTGAAATTGATTCCCTTAGGCGTTACCTAGGAATTTGGTACAAAAACATCTCCCCCAGAACGGTTGTTTGGGTGGCCAACAAAGAAAACCCACTTCTAGACCACTCTGGAGTCTTAAAAATTTTTTATGGGGATGTTTATATCACAGACGGCACAGGAGCCATAATATGGTCCCCAAATAACACAGCATACGATTCAGTCGCTATGGAGTTGTTGGAATCAGGAAACATGGTTGCGAAAGATGTTAATAACAAGATTTTATGGCAAAGCTTTGATTACCCTGATGATACTTTACTTCCAGGAATGAAACTTGGAATGGACTTGCGAACTGGTCATCAACGAGCTCTAACATCTTGGAGATCCTACAACGATCCTGCTCCAGGTGAATTTTCATTTAGGGTTCATACTGGTGGCCTTCCTCAAATAGTTATCACAAAGGGTTCTAGTGATGACATAGCTAATAGAGCAGCAGTTTATAGACCAGGGTCTTGGAATGGTCTTAGTCTGAATGGAGGAGTAGCAGGAGAAAGAATTTACCCGTTAATCAAATCCCTTTTTGTTATGAACAAGGATGAAATCTCGTATGAGATTCAAGCCTTGGATAGTTCAACTCTACTGAGAAGCAGATTGCTCCCTGATGGACATCTAATACGATTTATATGGTTAGATGGGTATAAAAGATGGGACACGGTATACGCTGCTTCATTTGATGAGTGCGAGAGATATGATATGTGTGGTGCAAATAGTATTTGCATTGGGAGTGGAGCACATCAACACTGCGAATGCTTAGGTGGATTCCAAACCTACTTTTCAGAATCAACTTGTTATCGAACTACACCTCCAGATTGCAACCAGGGAGATAGTTTTCAGAAGTACGAAGGGGTGAAATTGCCAGACACATCTTCATCTTGGTACAGTGACACAATCAGTGTTGACGAATGCCAGAAATTGTGCTTGACTAACTGCTCTTGTAGTGCATATTCTCATTTGAATACCAGTGCCAACGGAACAGCCTGCGTGTACTGGCTTCATGACATTGTTGACGTCAGGACACTACCAGAGAATGGACATTATTTTTATTTGCGAATTGCACCTTCAAAATTTCAAGGTCACGCCTTCAACATGCAGAAAAGAGATCAAGCCTTCGACAGGAGGAAGATCGGAGGAATTGTAGTAGGCGGTACTATATTCATCATTGTTATTGTAGTATTTGGGTTCATATTTTTTCTCAAGAGGAATAAACTCAAGCAATCAGCAGAAACAAACTATTGGACGGACAAGAACAAGAAAAATGACATTGATTTACCAATGTTCGACTTTTTATCCATCTCCAATGCTACAAATAACTTTTCTGAGAGTAATAAATTGGGACAAGGGGGATTTGGACCAGTGTACAAGGGCATATTATCAGATGGGCAAGAAATTGCAGTTAAGAAGCTTTCAAAAACTTCGCGACAAGGTTTGGACGAGTTCAAAAATGAAGTAATGTTGATTACAAAACTTCAACACTGCAATCTTGTAAAGCTTCTCGGTTGTTCTATTCAGCAAGATGAAAAGATACTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATTTTTGATTCAACAAGAAGTTCATTAATTGGTTGGGCTAAGAGATTTGAAATTGTTGATGGAATTGCCAGAGGACTCCTCTATCTTCACCAAGATTCTAGACTAAAAATCATTCATAGGGATCTCAAGACCGGTAATGTTCTTCTTGATAGTAATATGAAATCAAAAATATCAGATTTTGGTATGGCTAGGACATTTAGCCCGGATCAAGATGAAGCAAACAAAAATAAAGTGATGGGAACATATGGTTATATGTCTCCCGAATATGCTGTACATGGATCATTTTCAATCAAATCAGATATATTCAGTTTTGGGGTGATTGTATTGGAGATAATCAGTGGGAGGAAGAATAGAGGATTTCGTGACCCACACAATGAGCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCCATGGAACTAATGGATGGCTCGGTGAACAGTCAAGTTGAACTATCAAAAATGTTAAGATATATTCATATTGGTTTGTTATGCGTACAACATAGATCAGAGGATAGGCCAACCATGTCTTCCGTAGTTTTAATGTTGAATAGTGAAAATTTATTGCCTGAGCCAAGTCAACCTGGATTTTACCCAGGAACAAATAAGTTGACCATGACAGATTCTTCTCCAAGAAATTATGATGTGTATTCTCTCAACAAAATATCTGAGACATTATTTGAGGCAAGATAG 2487 0.3888 MKPKSMESFEMLGVYLCFLCFLSMSSTLEMITPTQPLRDSKNENETLVSTNGTFEAGFFSPEIDSLRRYLGIWYKNISPRTVVWVANKENPLLDHSGVLKIFYGDVYITDGTGAIIWSPNNTAYDSVAMELLESGNMVAKDVNNKILWQSFDYPDDTLLPGMKLGMDLRTGHQRALTSWRSYNDPAPGEFSFRVHTGGLPQIVITKGSSDDIANRAAVYRPGSWNGLSLNGGVAGERIYPLIKSLFVMNKDEISYEIQALDSSTLLRSRLLPDGHLIRFIWLDGYKRWDTVYAASFDECERYDMCGANSICIGSGAHQHCECLGGFQTYFSESTCYRTTPPDCNQGDSFQKYEGVKLPDTSSSWYSDTISVDECQKLCLTNCSCSAYSHLNTSANGTACVYWLHDIVDVRTLPENGHYFYLRIAPSKFQGHAFNMQKRDQAFDRRKIGGIVVGGTIFIIVIVVFGFIFFLKRNKLKQSAETNYWTDKNKKNDIDLPMFDFLSISNATNNFSESNKLGQGGFGPVYKGILSDGQEIAVKKLSKTSRQGLDEFKNEVMLITKLQHCNLVKLLGCSIQQDEKILIYEFMPNRSLDYFIFDSTRSSLIGWAKRFEIVDGIARGLLYLHQDSRLKIIHRDLKTGNVLLDSNMKSKISDFGMARTFSPDQDEANKNKVMGTYGYMSPEYAVHGSFSIKSDIFSFGVIVLEIISGRKNRGFRDPHNELNLLGHAWRLWIEKRPMELMDGSVNSQVELSKMLRYIHIGLLCVQHRSEDRPTMSSVVLMLNSENLLPEPSQPGFYPGTNKLTMTDSSPRNYDVYSLNKISETLFEAR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00654 828 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Viun11g00654 828 Pfam Protein tyrosine and serine/threonine kinase 513 779 IPR001245 GO:0004672|GO:0006468
Viun11g00654 828 SMART ntp_6 344 423 IPR003609 -
Viun11g00654 828 PIRSF SRK 3 828 IPR024171 GO:0004674
Viun11g00654 828 CDD B_lectin 44 154 IPR001480 -
Viun11g00654 828 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Viun11g00654 828 SMART blect_4 38 154 IPR001480 -
Viun11g00654 828 SUPERFAMILY Hairpin loop containing domain-like 347 414 - -
Viun11g00654 828 Gene3D Transferase(Phosphotransferase) domain 1 586 787 - -
Viun11g00654 828 Gene3D Hepatocyte Growth Factor 342 422 - -
Viun11g00654 828 CDD PAN_AP_plant 339 424 - -
Viun11g00654 828 ProSiteProfiles EGF-like domain profile. 295 332 IPR000742 -
Viun11g00654 828 Gene3D Phosphorylase Kinase; domain 1 470 585 - -
Viun11g00654 828 SMART serkin_6 510 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00654 828 CDD TM_EGFR-like 447 477 - -
Viun11g00654 828 Gene3D - 27 151 IPR036426 -
Viun11g00654 828 SUPERFAMILY Protein kinase-like (PK-like) 495 799 IPR011009 -
Viun11g00654 828 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00654 828 Pfam PAN-like domain 343 409 IPR003609 -
Viun11g00654 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Viun11g00654 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 475 585 - -
Viun11g00654 828 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Viun11g00654 828 CDD STKc_IRAK 516 782 - -
Viun11g00654 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 772 - -
Viun11g00654 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 789 - -
Viun11g00654 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 185 IPR036426 -
Viun11g00654 828 Pfam D-mannose binding lectin 81 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00654 Viun-Chr11 7572471 7577057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00654 447 804 Receptor kinase-like Gene Family AT4G23190 51.381 9.20e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00654 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00654 - - vun:114169003 1659.04