Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00609 ATGGCCATTGCTCTTATCTGCAACTTTTTATTACTCTTTTCTCAGATTTGCAGTGCAGCTTTCACCATCACCCAGCTCGAACCACTCTCCGACAATGGCACCACCTTGGTTTCCAAGGAGGGAACCTTCGAGATGGGTTTTTTCAGTCCAGGGAGTTCCGACAAGCGCTACATCGGAATCTGGTACAAAAACATCCCTGTCAAAACGGTGGTTTGGGTGGCCAACCGCGACAATCCAATCACACACAACAACAATAACAACAGCGGCAGCAACAACAACTCCGGCACAAACAAGTTTGTCATAAGCCAAGAGGGAAACCTCGTACTCTTCACCGAGAACGAGACTCTTGTTTGGTCTGCAAATGCAACGAAGAAGGTTTCGAATCCAGTTGTGCAGCTCTTAGATTCTGGAAACTTGGTTCTAACTGATGCAAATGACGAGACTGTTTTTCTGTGGCAGAGCTTTGACTTTCCCTGTGACACACTGTTACCAGGGATGAAACTTGGGTGGGACTTGAAAACCGGTCTGAACCGGAAACTAACAGCATGGAAAACATGGGACGATCCATCTTCCGGGGACTTCACATGGGGGGTGGAGTTAGGAAGCAACCCCGACATCGTGATGTGGAAGGGCAAAACCGAGTACTTCAGGACAGGACCCTACACCGGGAACATGTTCAGCGGGGTATACGGTCCCAGAAACAACCCACTCTACGATTACGTTTTCGTCAACAACACAGACCAAGTCTACTACCGATACACCCTGCGGAACGCTTCCGTCATCACCATAATCGTCATGAACCAAACCCTCTATCTCCGCCACCGCGTCACGTGGATTCCGGAGGCCAAAGCCTGGACCATTTACCAGTCGCTGCCGATAGACAGCTGCGACGTGTACAACACGTGCGGACCCAACGGAAAGTGCGCGATCGCGGGGTCGCCGATTTGCCAGTGCCTGGATGGGTTCGTGCCGAAATGGTTGCAGCAGTGGAACGCGATGGATTGGAGAGAAGGGTGCGTGCGGAGTGAGGAGTGGAAGTGTGGGGTGAAAGACAGAGATGGGTTTCGCAGATTTGGGGCTATGAAATTGCCGAACACCACTGGTTCTTGGGTGAATCAGAGTATGACGCTTGAGGAGTGTAGGGATAGGTGTTTGAGGAATTGTTCTTGCAGTGCGTATTCGAATCTGGACACCAGAAATGGAGGGAGTGGGTGCTCTATTTGGTTTGGGGATCTTTTTGATCTCAGAGTTATCGAGAGTGGACAAGATTTGTATGTTCGAATTGCCACTTCGGAAACAGATGGTAAACAGGGCCGGAGGAAAAAGGTAATCGCGGTGGCTTCAGCCGTCGCATCGTTGGTGTTTGTGATGCTATTAACATTCTGCATTTACATCACCAAACGAAGATATAAAGGGAAAACGGAAACAAAAATGGCAACCGTGGATAAAAATGAAGGAAAACAAGAAGATTTGGAGCTTCCTTTCTTTGATCTTGCTACATTGGTTAAAGCCACTAATAACTTTTCAATTGAGAATAAGCTTGGTGAAGGTGGTTTTGGACCTGTATACAAGGGTACATTAGTAGACGGACAAGAAATTGCAATCAAAAGACTTTCACGAAGTTCAGGACAAGGTTTGAAAGAATTTAGAAATGAAGTTATATTGTGTGCTAAACTTCAACATCGAAATCTTGTTAAGGTTATTGGTTATTGCATTGAACATGAGGAGAAGATGCTACTTTATGAATACATGCCCAACAAAAGTCTTGATTTAATTATTTTTGATACATATAAAAGTAGGTTTTTAGATTGGCAAATGCGTTTCAACATTTTGAATGCAATTGCTCGAGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTCAAACTAAGTAATATTTTATTAGACAATGATATGAATCCAAAAATTTCTGACTTTGGCCTTGCAAGAATATGCGGAAGTGATCAAGTTGAAGGAAGTACAAGCATCATAGTTGGAACTCATGGTTACATGGCACCTGAGTATGCTATTGATGGCTTGTTCTCTACAAAATCGGATGTGTTCAGCTTTGGAGTGTTGTTACTAGAAATTCTTAGTGGAAAGAAAAATAGAGCACTTACCTTCCAAGACAACAACCATAACCTCATTGATCATGCATGGAGTTTGTGGAAAGAGGGTACTCCAGAGCAATTGATTGATGCTTGTTTGGAGGACTCATATAATGTGTTTGAAGTTGTACGATGTATTCAAATTGGTCTTTTATGTCTACAACATCATCCAAATGATAGGCCAAACATGACATCAGTTGTTGTTATGTTGACTAGCGAAAATGCTTTACCTGAACCTAAGGAGCCTGGTTTCTTAATTAGAAAGATCTCAAAAGAAGGGGAAGATTCTTCTAATAGACAAACATCTTCTTCAGTCAATGAGGCATCTATTTCACTTTTAAATGCTAGATAA 2478 0.4354 MAIALICNFLLLFSQICSAAFTITQLEPLSDNGTTLVSKEGTFEMGFFSPGSSDKRYIGIWYKNIPVKTVVWVANRDNPITHNNNNNSGSNNNSGTNKFVISQEGNLVLFTENETLVWSANATKKVSNPVVQLLDSGNLVLTDANDETVFLWQSFDFPCDTLLPGMKLGWDLKTGLNRKLTAWKTWDDPSSGDFTWGVELGSNPDIVMWKGKTEYFRTGPYTGNMFSGVYGPRNNPLYDYVFVNNTDQVYYRYTLRNASVITIIVMNQTLYLRHRVTWIPEAKAWTIYQSLPIDSCDVYNTCGPNGKCAIAGSPICQCLDGFVPKWLQQWNAMDWREGCVRSEEWKCGVKDRDGFRRFGAMKLPNTTGSWVNQSMTLEECRDRCLRNCSCSAYSNLDTRNGGSGCSIWFGDLFDLRVIESGQDLYVRIATSETDGKQGRRKKVIAVASAVASLVFVMLLTFCIYITKRRYKGKTETKMATVDKNEGKQEDLELPFFDLATLVKATNNFSIENKLGEGGFGPVYKGTLVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVIGYCIEHEEKMLLYEYMPNKSLDLIIFDTYKSRFLDWQMRFNILNAIARGLLYLHQDSRLRIIHRDLKLSNILLDNDMNPKISDFGLARICGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEILSGKKNRALTFQDNNHNLIDHAWSLWKEGTPEQLIDACLEDSYNVFEVVRCIQIGLLCLQHHPNDRPNMTSVVVMLTSENALPEPKEPGFLIRKISKEGEDSSNRQTSSSVNEASISLLNAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00609 825 SMART blect_4 27 158 IPR001480 -
Viun11g00609 825 SMART serkin_6 508 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00609 825 Gene3D Transferase(Phosphotransferase) domain 1 584 789 - -
Viun11g00609 825 MobiDBLite consensus disorder prediction 799 825 - -
Viun11g00609 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 583 - -
Viun11g00609 825 Pfam D-mannose binding lectin 69 184 IPR001480 -
Viun11g00609 825 ProSiteProfiles PAN/Apple domain profile. 347 429 IPR003609 -
Viun11g00609 825 Pfam PAN-like domain 347 415 IPR003609 -
Viun11g00609 825 Gene3D Phosphorylase Kinase; domain 1 465 583 - -
Viun11g00609 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 770 - -
Viun11g00609 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Viun11g00609 825 Gene3D - 15 155 IPR036426 -
Viun11g00609 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 155 - -
Viun11g00609 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 189 IPR036426 -
Viun11g00609 825 CDD STKc_IRAK 514 780 - -
Viun11g00609 825 CDD B_lectin 27 158 IPR001480 -
Viun11g00609 825 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Viun11g00609 825 SMART ntp_6 350 428 IPR003609 -
Viun11g00609 825 Gene3D Hepatocyte Growth Factor 346 429 - -
Viun11g00609 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Viun11g00609 825 SUPERFAMILY Protein kinase-like (PK-like) 491 792 IPR011009 -
Viun11g00609 825 CDD PAN_AP_plant 350 429 - -
Viun11g00609 825 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Viun11g00609 825 ProSiteProfiles Bulb-type lectin domain profile. 20 154 IPR001480 -
Viun11g00609 825 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00609 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Viun11g00609 825 MobiDBLite consensus disorder prediction 805 825 - -
Viun11g00609 825 Pfam Protein kinase domain 509 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00609 825 Pfam Domain of unknown function (DUF3403) 781 825 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00609 Viun-Chr11 6738814 6745548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00609 437 825 Receptor kinase-like Gene Family AT4G05200 49.000 3.67e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00609 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00609 - - gmx:100776310 1354.73