Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00585 ATGGCTCTCTGTATCAGACCCTCTCTCAGATTGCAGGGTGAACGAAGCGATTGGATCGGCTACTGCGATTCTCTGATGGCGAGGTTGGCGCTGTGCAGCATCTGCTCACATGACAAAAGCGACGGCAGTGACGCGGGGATACCGGACTTGGAGATACTGGAGGTGGTGGCGGACGGTGGCTACGGCCGAGTCTACCAGGGCTTCGAGCCTTCCACCGGTGAAATCGTCGCCATGAAACAGATAGTAATAATCGGCTCGAGACAGGGTGTTCCGTCTGCGATCATTCGCGAAGTGGCGTTCCTCAAAGAACTCCGCCATGACAACATTGTGAGGTTGCTTAGAGTCTATGTCAGAAGACACAGATATGTCAATCTTGTTTTCGAGCGTCTTCCGTGCGACCTTCATGACTATATTAGGCGCAGGACTCATCGCAATATGTTGGCTATAAAGAGTTTCATGTACCAGATACTCTCTGCTCTGGAATTCTGCCATGCGCGTCAGGTTCTGCACAGAGATTTGAAACCCAGCAATGTGCTGATTGATCAAGCTAGCATGCTGGTCAAACTGGCGGATTTTGGTTTGGCTAGAGAGTTTAGAAATGACATATTATATACTGACCAGTTAGGAACTGCCGCGTATAGAGCACCTGAAATGTTGTGCGATAACTATCAATATTCATCTCCAATTGATGTGTGGGCTGCTGGCTGTGTATTTGCTGAGATGATAACTGGACTACCTTTATTCCAAAATAGGAAGTTGCGGGATGAGTTGGAGGCAATTTTCAGACTGACAGGTACCCCCACAGAAGAAACATGGCCAGGAATCACTGAATTAATGCCTGACATCCATAAGTACCAGGGACATGAGCCAGTGGGCATACGGACATTGTTTCCTGAACTGGAACGAAGTGGCCAGGATCTTCTATCAAGAATGCTTTGCTTGAACCCAAATGAAAGGATTTCTGCGTCAGCTGCTCTAAATCATCCTTACTTTACGGAAGAAGAATGGCTTTGGGATGGAAAGCCATGGGAGGAGTCGGCGAGATGCATTCCTTTTCGATGA 1062 0.4812 MALCIRPSLRLQGERSDWIGYCDSLMARLALCSICSHDKSDGSDAGIPDLEILEVVADGGYGRVYQGFEPSTGEIVAMKQIVIIGSRQGVPSAIIREVAFLKELRHDNIVRLLRVYVRRHRYVNLVFERLPCDLHDYIRRRTHRNMLAIKSFMYQILSALEFCHARQVLHRDLKPSNVLIDQASMLVKLADFGLAREFRNDILYTDQLGTAAYRAPEMLCDNYQYSSPIDVWAAGCVFAEMITGLPLFQNRKLRDELEAIFRLTGTPTEETWPGITELMPDIHKYQGHEPVGIRTLFPELERSGQDLLSRMLCLNPNERISASAALNHPYFTEEEWLWDGKPWEESARCIPFR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00585 353 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Viun11g00585 353 FunFam Mitogen-activated protein kinase 130 348 - -
Viun11g00585 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Viun11g00585 353 ProSiteProfiles Protein kinase domain profile. 50 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00585 353 PANTHER CELL DIVISION PROTEIN KINASE 51 333 - -
Viun11g00585 353 SUPERFAMILY Protein kinase-like (PK-like) 49 336 IPR011009 -
Viun11g00585 353 Pfam Protein kinase domain 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00585 353 SMART serkin_6 50 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00585 353 Gene3D Transferase(Phosphotransferase) domain 1 131 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00585 Viun-Chr11 6396053 6399218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00585 51 333 Core Cell Cycle Gene Families AT3G48750 43.357 2.79e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Viun11g00585 Pkinase 9.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00585 K02206 - gmx:100799974 372.474