Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00577 ATGGGATGGATGTCACATGGTTTGGCTTTTGCACTTGTTGCTGTGTTGTTCTGTCTCTTCAGTTGCTTCGTTAGCTTTGCGCAAGCTCAATCTTCGAACGCCACCACTGACCCTTCTGAAGCAAGAGCTTTAAATTCGATCTTCAGCAGATGGGGTATCTCTGCAGACACAAGTGTGTGGAATATAAGCGGTGAACTGTGCAGTGGAAGTGCCATCGATAGTACCTCCACCCCTGAAAGTTACAATCCATTTATCAGATGTGACTGTTCCTTTGACAGTGGAACTATTTGCCGCATCACAGCACTGAGGGTCTATGCACTGGACAACGTGATTGGTGACATTCCAGAAGAGCTATGGACTCTCACATATCTCACCAATTTAAATCTTGGGCAAAATTACTTGACGGGTTCTCTACCTCCAGCTATTGGAAATCTAACTCGTATGCAATACTTGAGCCTTGGAATCAATAATTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTACGGACTTAATAGTACTGAGTATTTCGTCAAACAATTTCTCAGGATCTCTCCCATCCGAACTTGGGAAACTCACAAGTTTACAACAACTCTACATTGATAGTGCCGGAATTAGTGGTCCAATTCCATCCTCATTTGCAGACCTTAGGAGTTTGGTGACAGTATGGGCTTCAGACGTGGAATTCACAGGCAATATACCAAGCTTCATAGGGAATTGGACTGGGCTTCAAGTCTTGAGGTTTCAAGGCAATTCTTTTAATGGCTCAATACCCTCATCATTTTCCAACTTGACTTCTTTAACAGAATTGCGAATAAGTGGTTTATCTAATGGGAGCTCCTCACTGGAATTTGTACAGGATATGAAATCTTTGACTATCTTAGAATTGAGGAACAACAATATTTCTGGTTCGATTCCATCCTTCATTGGAGAGTTACACAATTTGACCCAACTGGATTTAAGTTTCAATAACATCGAAGGACAAATTCCGGGTTCAATTTTCAATTTGAGCTCGCTCACTACCTTGTTTCTTGGAAATAATAAACTAAATGGCACCCTTCCGACGCAGATACGTTCATCACTTCAGAATATAGACCTGTCATACAATGATCTATCAGGCAGCCTCCCCTCTTGGGTAAACGAAGCAAATTTACAACTGAATTTAGTTGCTAACAACTTGTCGATAGATGATGGTTCAGATACCAGTGGCTTGCCATTTGGGCTCAACTGTCTCCAGAAAAATTTTCCTTGCAATCGAGGTGCTGGAAGATATTCTGACTTTGCAATCAAGTGTGGAGGAACCCAAATTATGTCCACAGAAGGAATCACATATGAAAGGGAGAATGAGACACTTGGTTCTGCTACATACTTTGTTACTGATACAAAGCTCTTCCAAACAGCACGAATTTCTCCTTCATCATTAAGATATTATGGCTTAGGGCTGGAAAATGGCTTTTACAACATCACCCTTCAATTTGCTGAAACAGCTATTCAGGATTCTACTACATCATGGCAAAGTCTTGGGAGACGAGTCTTTGATATATATATTCAGGGGAATCTTGTTTTGAAAGATTTCGACATAAAAAAGGAAGCTGGGGGCATCTCGTTCAGAGCTGTCCAAAGGCAATTTAGGTTTGAAGTGACGGAAAACTATATTGACATCCATCTCTTTTGGGCTGGAAAGGGGACTTGTTGCATACCAGCCCAAGGTACTTATGGGCCCTTGATTCAAGCCATCCATGCTATTCCAGATTTTATACCTACTGTCAGTAATGAACCTCCAAGCAATAAAAGTAATAGAACAGGCCTTATTGTTGGAATTGTTGTTGGAGTTGGAGTTGTAAGCTTCCTATCAGTTTTTTTGATTTTCTGGATCATTAGGAGAAGAAAACAACGTCAGCATGAGGATGAAGAGCTTTCAGGAATTGATACAAAGCCATACACTTTCAGTTATTCTGAGTTGAAGAATGCTACAAATGACTTTAATCTCGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAGTGATGGAAGAGTTATTGCTGTGAAACAACTGTCAGTGGCATCCCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCTACTATATCAGCTGTACAACATCGTAATCTGGTTAAACTGTATGGATGTTGCATTGAGGGAAATAAGAAACTTCTTGTGTACGAATATCTAGAGAATAAGAGTCTTGATCAAGGATTATTTGGAAATTCTTTAACCCTCGATTGGTCCACACGCTATGATATCTGCGTGGGTATTGCCAGAGGTTTAGCTTATTTGCATGAAGAGTCCCGTCTCCGTATTGTACACCGTGACGTGAAGGCCAGTAATATTTTGCTTGACTATGAGCTTGTACCCAAAATATCTGATTTTGGGTTGGCCAAATTGTACGATGATAAAAAGACCCACATAAGCACCCGTGTAGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATATATTTTCATTTGGTGTTGTTGCTCTTGAGTTAGTTAGTGGGAGACCAAATTCTGATTCAAGTTTGGAAGGAGAAAAGGTGTATCTTCTTGAATGGGCTTGGCAACTTCATGAAAGCAACCTCATAATGGATCTAGTGGACCCTAGACTCTCAGAATTCAACGAGGAAGAAGTAAAACGTATTGTGGGAATAGCACTTCTGTGCACTCAAACATCACCATCATTAAGACCATCAATGTCACGAGTGGTGGCAATGCTTTCAGGAGATATTGAAGTGAGCACTGTGACTTCAAAGCCTGGATACCTTACTGACTGGAAATTTGACGATGTGAGCAGCTTCATGACTGACAATGCAATCAAAGGATTGAATACAAGTTACCAGTCTTCATCAGGAAGTACCAGCATGGTGGGTGGTGCAGACTATTCACCAATAAGTGTTTCTAAACCGATCCTTGAGGATACTCTTGATGAGGGTAGGTAA 3009 0.4118 MGWMSHGLAFALVAVLFCLFSCFVSFAQAQSSNATTDPSEARALNSIFSRWGISADTSVWNISGELCSGSAIDSTSTPESYNPFIRCDCSFDSGTICRITALRVYALDNVIGDIPEELWTLTYLTNLNLGQNYLTGSLPPAIGNLTRMQYLSLGINNLSGELPKELGNLTDLIVLSISSNNFSGSLPSELGKLTSLQQLYIDSAGISGPIPSSFADLRSLVTVWASDVEFTGNIPSFIGNWTGLQVLRFQGNSFNGSIPSSFSNLTSLTELRISGLSNGSSSLEFVQDMKSLTILELRNNNISGSIPSFIGELHNLTQLDLSFNNIEGQIPGSIFNLSSLTTLFLGNNKLNGTLPTQIRSSLQNIDLSYNDLSGSLPSWVNEANLQLNLVANNLSIDDGSDTSGLPFGLNCLQKNFPCNRGAGRYSDFAIKCGGTQIMSTEGITYERENETLGSATYFVTDTKLFQTARISPSSLRYYGLGLENGFYNITLQFAETAIQDSTTSWQSLGRRVFDIYIQGNLVLKDFDIKKEAGGISFRAVQRQFRFEVTENYIDIHLFWAGKGTCCIPAQGTYGPLIQAIHAIPDFIPTVSNEPPSNKSNRTGLIVGIVVGVGVVSFLSVFLIFWIIRRRKQRQHEDEELSGIDTKPYTFSYSELKNATNDFNLENKLGEGGFGPVYKGTLSDGRVIAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGNKKLLVYEYLENKSLDQGLFGNSLTLDWSTRYDICVGIARGLAYLHEESRLRIVHRDVKASNILLDYELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHESNLIMDLVDPRLSEFNEEEVKRIVGIALLCTQTSPSLRPSMSRVVAMLSGDIEVSTVTSKPGYLTDWKFDDVSSFMTDNAIKGLNTSYQSSSGSTSMVGGADYSPISVSKPILEDTLDEGR 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00577 1002 FunFam Os05g0263100 protein 41 278 - -
Viun11g00577 1002 CDD STKc_IRAK 668 929 - -
Viun11g00577 1002 ProSiteProfiles Leucine-rich repeat profile. 315 337 IPR001611 GO:0005515
Viun11g00577 1002 Gene3D Phosphorylase Kinase; domain 1 625 737 - -
Viun11g00577 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 963 - -
Viun11g00577 1002 Gene3D - 427 584 - -
Viun11g00577 1002 SUPERFAMILY Protein kinase-like (PK-like) 644 949 IPR011009 -
Viun11g00577 1002 Pfam Protein tyrosine and serine/threonine kinase 663 929 IPR001245 GO:0004672|GO:0006468
Viun11g00577 1002 ProSiteProfiles Protein kinase domain profile. 662 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00577 1002 FunFam Putative LRR receptor-like serine/threonine-protein kinase 279 402 - -
Viun11g00577 1002 Gene3D Ribonuclease Inhibitor 37 276 IPR032675 -
Viun11g00577 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Viun11g00577 1002 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 941 - -
Viun11g00577 1002 Gene3D Transferase(Phosphotransferase) domain 1 738 941 - -
Viun11g00577 1002 SUPERFAMILY L domain-like 96 398 - -
Viun11g00577 1002 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Viun11g00577 1002 Gene3D Ribonuclease Inhibitor 277 399 IPR032675 -
Viun11g00577 1002 Pfam Malectin domain 427 580 IPR021720 -
Viun11g00577 1002 FunFam Leucine-rich repeat receptor-like protein kinase 631 737 - -
Viun11g00577 1002 SMART serkin_6 662 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00577 Viun-Chr11 6347620 6359573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00577 148 1002 Receptor kinase-like Gene Family AT1G56120 61.504 0.0 1089
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00577 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00577 - - lang:109352863 1498.03