Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00573 ATGAAGCAGCTGATTCGCAAGCTCTCGCGCGTGGGCGACTCCTCGCAGTACACGCTCCTCCGCTCCGACTCCCGGCGGCCGCGCCGCGCCGGGTCCCTCCGCCGGCACGTGGGAGTTCCCGTGGGGCACGTGCCGGTCTACGTGGGCGAGGAGATGGAGCGGTTCGTGGTGAGCGCGGAGCTGCTGAACCACCCGGTTTTCGTGAAGCTCCTGAACCGGTCCGCGCAGGAATACGGGTACGAACAGAAGGGTGTGCTCCGAATACCCTGCCACGTCATCGTGTTCCAGCGAGTTCTGGAAGCGCTTCGACTCGGTCGCAACTCGCTCCAAGACATTCATGACCTCCTTACCTCTTCCCAAGAATTTTCCTAG 372 0.6317 MKQLIRKLSRVGDSSQYTLLRSDSRRPRRAGSLRRHVGVPVGHVPVYVGEEMERFVVSAELLNHPVFVKLLNRSAQEYGYEQKGVLRIPCHVIVFQRVLEALRLGRNSLQDIHDLLTSSQEFS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00573 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 98 IPR003676 GO:0009733
Viun11g00573 123 Pfam Auxin responsive protein 30 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00573 Viun-Chr11 6150771 6151574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00573 39 113 Calmodulin-binding Proteins AT5G20810 40.000 1.60e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00573 K14488 - cave:132175866 171.4