Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00553 ATGAAAAAGATCAATCTTTTACTCAGAAAATGCAAGAGTTTGTCAAGGCAGCTAGGGAGATCTTCATCATACAGTAGCCTGAGGTCCAAATCCACAAAAGAAGACATATGGGGTGGCCATGGCATGCAAGAAGATGAACATTGTGAGACAGTGTTTGTTGGTAGCACAAGAAAACGGTATGTGATCAGCAAAAAGTATCTGAACCATCCTCTTCTGAATGAACTCATCAACAAGTCAAAGCCAAAGGGTAGTAGTGATGATGATGAGAGTAGTGTTTTGGTGGTGAACTGTGAGGTGGTTCTCTTTGATCATCTTTTGTGGATGCTAGAAAATGCAGATCCTAAGTTTAGTTCTGAGTCTTTGGAGGAATTGGCTGAACTCTATGTGTTTTGA 393 0.4046 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGHGMQEDEHCETVFVGSTRKRYVISKKYLNHPLLNELINKSKPKGSSDDDESSVLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00553 130 PANTHER EXPRESSED PROTEIN 7 129 - -
Viun11g00553 130 Pfam Auxin responsive protein 31 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00553 Viun-Chr11 5780208 5781541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00553 50 111 Calmodulin-binding Proteins AT5G20810 35.484 4.69e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00553 - - gmx:100500162 209.534