Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00537 ATGAGGCTTATCCTACACAAACTACTGCTTGCTTTCATGCACTTGTGGTTGTGCTGGAGTTCTTCCACTCATGTTCATGCAGCAGATGACAGTTTAAAACCAGGTGAAACGCTGAAATATTCTTCACCATCACTATATTCTAAGAGTCGCAAATATTTTCTGGAATTTTTTAGTGTGAGTGAAGCTCTTACTTACTTAGCAATACGAAGTGAAGATGAGATAGTTTGGGAGGGTAATAGAGAACAACCAGTGAATCAGAGTGACGCGGTTCTCTCCCTAGACTTCTCAGGGTTTCTGAAAATAGAACCTGGATCTCTGAAAAAACCAATTATTCTGTATTCTCCTCCTCAACCTATCAACAACACTGTGGCTACTTTGTTGGACACAGGGAACTTTGTGCTTCAACACCTTCACCCCAATGGGACAAACATTCTTCTGTGGCAGAGTTTTGATTACCCCACGAAAACTTTGGTCCCTACCATGAAGTTAGGTGTTAATCACAAAACAGGCCACCGTTGGTTACTTGTTTCACAGATCACCATTGAGCTTGCGACTCCAGGTGCCTTTAGTCTTGAATGGGAACCGAAGGAACAGAAACTGATGATAAGAAGACGAGGGAAAGTTTGTTGGAAAAGTGGGAAAATGAAGAACAATAGATTTGAGAACATCCCAGAAGATGCACAAGGCGTGTTGAAGTACACCATAGTGTCTAATGAGGAAGAAGATAGCTTCTCTTTCACATCTACAAATGAAAACCTTACACGTTGGTGGTCCCTTTCGGATACTGGGAGGTTATCTTACAATAATAAAGAGGGATATGTTGCAAGGGCTGATTTGTGTTATGGATATAACACAGAAGGAGGGTGCCAAAGTTGGCAGGGTATACCTAAGTGCAGGAGTCCTGGTGATGTGTTCACCAAAAAGAGTCTTCGCCTTAATTACCAAAATCAAACCAATGATGACAATCAGAATATTAGTCACAGTGATTGTGAGGCTGCTTGCTGGAGCGATTGTAATTGCAATGGATTTGCAGAATATTTTGATGATGGAACTGGATGTAGTTTCTATCATTGGAATTCATCCAAAGATATTATAGTTGACGACAGTGTTTATGGTCAAGAATTTTACATACTGGAGAACAAAGGAAACATAACCCTTCTTCATCACGGTACAAAAAGGTGGATATGGATAAGTACAATAATAGCAACTACTTTACTGATAACATGTGCATCCGTTCTATTCCTAGCCGTAAAGAAAAGAAAACAAGTTCTTCAAGAGAAGAGAAGGAAAGAAATGGCGATGAAATCATCTCTAATAGACGATTTTCGAAATGAATTGAAAAAGGGCCACGGTTTAAAAGTATTCGATTATACGTTGGTTATGGCAGCCACAAATGGATTTTCATCTGAAAACAAGTTAGGACAGGGAGGTTTCGGACCAGTTTATAAGGGAACTTTGCCAGCGGGAGAGGAGGTTGCCATAAAAAGACTTTCGAGAAGTTCTGCACAAGGAATTGTGGAGTTTAAAAATGAACTAACACTTATATGCGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGCTGCATTCATGTAGAAGAGAAGATTCTAATTTACGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGACTGTACAAGAAGCAAATTGCTAGATTGGAATAAGCGGTTCAACATAATACAACGAATTGCTCAAGGATTATTGTATCTTCACAAGTATTCAAGACTCAGTCATTCACAGAGACTTGAAAGCCAGTAA 1788 0.3949 MRLILHKLLLAFMHLWLCWSSSTHVHAADDSLKPGETLKYSSPSLYSKSRKYFLEFFSVSEALTYLAIRSEDEIVWEGNREQPVNQSDAVLSLDFSGFLKIEPGSLKKPIILYSPPQPINNTVATLLDTGNFVLQHLHPNGTNILLWQSFDYPTKTLVPTMKLGVNHKTGHRWLLVSQITIELATPGAFSLEWEPKEQKLMIRRRGKVCWKSGKMKNNRFENIPEDAQGVLKYTIVSNEEEDSFSFTSTNENLTRWWSLSDTGRLSYNNKEGYVARADLCYGYNTEGGCQSWQGIPKCRSPGDVFTKKSLRLNYQNQTNDDNQNISHSDCEAACWSDCNCNGFAEYFDDGTGCSFYHWNSSKDIIVDDSVYGQEFYILENKGNITLLHHGTKRWIWISTIIATTLLITCASVLFLAVKKRKQVLQEKRRKEMAMKSSLIDDFRNELKKGHGLKVFDYTLVMAATNGFSSENKLGQGGFGPVYKGTLPAGEEVAIKRLSRSSAQGIVEFKNELTLICELQHMNLVQLLGCCIHVEEKILIYEYMPNKSLDFYLFDCTRSKLLDWNKRFNIIQRIAQGLLYLHKYSRLSHSQRLESQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00537 595 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 571 - -
Viun11g00537 595 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Viun11g00537 595 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 175 IPR036426 -
Viun11g00537 595 ProSiteProfiles Protein kinase domain profile. 467 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00537 595 Gene3D - 22 150 IPR036426 -
Viun11g00537 595 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 430 542 - -
Viun11g00537 595 SMART tyrkin_6 467 592 IPR020635 GO:0004713|GO:0006468
Viun11g00537 595 Pfam PAN-like domain 298 357 IPR003609 -
Viun11g00537 595 Pfam D-mannose binding lectin 74 177 IPR001480 -
Viun11g00537 595 Pfam Protein tyrosine and serine/threonine kinase 470 583 IPR001245 GO:0004672|GO:0006468
Viun11g00537 595 SMART blect_4 29 153 IPR001480 -
Viun11g00537 595 SUPERFAMILY Protein kinase-like (PK-like) 452 583 IPR011009 -
Viun11g00537 595 Gene3D Transferase(Phosphotransferase) domain 1 452 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00537 Viun-Chr11 5465892 5469172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00537 392 591 Receptor kinase-like Gene Family AT4G23230 46.000 5.49e-47 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00537 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00537 - - vun:114169232 1188.33