Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00536 ATGTCTCCGGAATATGCTATGGAAGGAATTTTTTCTACAAAGTCAGATGTGTACAGCTTTGGAGTGTTGTTGCTTGAAATAGTTTGTGGACGAAAAAACACTAGCTTTTATGATGATGAACACCCAATAAATCTAATTGGACATGTATGGGAATTATGGAAAGATGGAAAGTGTTTTGAATCAGTGGATCCCTCATTAGAGGAAGTATTTGATTGTGATGAAGTGCAGAGGTGTATTCATGTTGGTCTCCTATGTGTTGAACAATATGCAAATGATAGACCAACAATGTCTGACGTTATATCAATGTTGACAAATAAGAGTGAAATAGTGTCTTTACCTAAAAGACCAGCATTCTATGTTCAAAGAGAGATGCTTAACCAAAATTTATCTTCTCCGGGGCTGTGTACTGCTTCTACGTGGAGTTCTAAGACTTCTCCCGTTTTCCGTTTTGACGAGGGCCGCGTTGAGGCAGCGTACTACGGCCCCTCCAGAGCCGTGCCGAGGTGA 507 0.4083 MSPEYAMEGIFSTKSDVYSFGVLLLEIVCGRKNTSFYDDEHPINLIGHVWELWKDGKCFESVDPSLEEVFDCDEVQRCIHVGLLCVEQYANDRPTMSDVISMLTNKSEIVSLPKRPAFYVQREMLNQNLSSPGLCTASTWSSKTSPVFRFDEGRVEAAYYGPSRAVPR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00536 168 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Viun11g00536 168 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Viun11g00536 168 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00536 168 SUPERFAMILY Protein kinase-like (PK-like) 1 132 IPR011009 -
Viun11g00536 168 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00536 Viun-Chr11 5461021 5462296 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00536 1 121 Receptor kinase-like Gene Family AT4G11480 54.098 2.14e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00536 PK_Tyr_Ser-Thr 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00536 - - vun:114169229 261.151