Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00534 ATGAGGCTTATCTTACAGAAACTACTGCTTCCTTTCATGCACTTGTGGTTGTGCTGGAGTTCTTGTGTTCATGTTCACGCAGCACATGACAGTTTAAAGCCCGGTGATACACTGAATTCTTCCTCACCATCACTATATTCAAAGAGTCGCAAATATTTTCTCAGATTTTATACGATTGGAATTGCGGATGGAGATTTTACTTACTTGACAGTCCAAAGTGCATATGAGAATCAGATAGTTTGGAAGGGTAATAGGGAACAACCTATCAATGATGACGCAGTTCTATCCCTAAACTTCTCAGGCGTGCTGAAAATAGAATCTGAATCTGTGAAGAAACCAATAATTCTGTATTCTCCTCCTCAACCTATCAACAACACTGTGGCCACTTTGTTGGACACAGGCAACTTTGTGCTTCAACATCTTCACCCCAATGGGAGGTTATCTTACAACAACAAAGAGGGATATGTTGCAAGGGCTGATCTGTGTTATGGATATAACACAGAAGGAGGGTGCCAAAGATGGCAGGATATACCTAAGTGCAGGAGTCCTGGTGATGTCTTCACCAAAAAGATTCTTTTCTCTAATTATGAAAATCAAACCTTTGAATTCAATCAGAATATTATTCACAGTGATTGTGAGGCTGCTTGCTGGAGCGATTGTAATTGCAATGGATTCAGAGAACTTTCTGATGATGGAATTGGATGTGATTTCTATCATTGGAATTCATCCAAAGATATTATAGTTGACGGCACTACTTCGGGTGAAGACGTTTACATACTGGAGACCAAAGGGAAGATAATAACCCCTCATCATCACGGTAAAAAAAGTTGGATATGGATAAGTACAGTAATAGCAGCCACTATACTGCTAATATGCGCATCCATTCTGTTCGTAGCCATAAAGAAACGAAAACATGTGCTTCAAGAGAAGAAACGGAAAGAAATGGCGATGAAATTATCCGAAATCGATGATTTTGGAAATGATTTTAAAAAGGGACACGGTTTGAAAGTGTTCGATTATACATTAGTTGTGGAAGCCACAAATGGGTTTTCATCCGAAAATAAGTTAGGACAGGGAGGTTTTGGACCAGTTTATAAGGGAACTTTGCCAACAGGAGAGGAGGTTGCTATAAAAAGGCTTTCAAAAAGTTCGACACAGGGAATTGTGGAGTTTAAAAACGAAGTAACACTAATATGTGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGCTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGATTTTGGAATGGCTAGAATGTTTACCCAACAAGACTCCGTATCAAATACCAACAGGGTTGTTGGGACATACGGTTATATGTCTCCGGAATATGCTATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTACAGTTTTGGAGTGTTGATGCTTGAGATCGTTTGTGGACGGAAAAACACTAGTTTTTATGATGATGATCACCCAATAAATTTAATTGGACACGTATGGGAATTATGGAAAGATGACAAGTGTGTTGAATCAGTGGATCCATCATTAATGGAGTCATTAGATTCTGATGATGTGCAGAGGTGTATTCATGCCGGTCTTCTATGTGTTGAACATTATGCAAATGATAGACCTACAATGTCTGATGTTATATCAATGTTGACAAACAAGAGTGAAAGAGTGTCTTTACCTAAAAGACCAGCATTTTATGTTCAAAGAGAGATGCTAAACGAAAATTTATCTTCTGCGGGGCTATGTACCGCTTCTACAGTAGAAATTACTACTTCGTTGGAAATAGAATTATCTCAGTGA 1845 0.3843 MRLILQKLLLPFMHLWLCWSSCVHVHAAHDSLKPGDTLNSSSPSLYSKSRKYFLRFYTIGIADGDFTYLTVQSAYENQIVWKGNREQPINDDAVLSLNFSGVLKIESESVKKPIILYSPPQPINNTVATLLDTGNFVLQHLHPNGRLSYNNKEGYVARADLCYGYNTEGGCQRWQDIPKCRSPGDVFTKKILFSNYENQTFEFNQNIIHSDCEAACWSDCNCNGFRELSDDGIGCDFYHWNSSKDIIVDGTTSGEDVYILETKGKIITPHHHGKKSWIWISTVIAATILLICASILFVAIKKRKHVLQEKKRKEMAMKLSEIDDFGNDFKKGHGLKVFDYTLVVEATNGFSSENKLGQGGFGPVYKGTLPTGEEVAIKRLSKSSTQGIVEFKNEVTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDFGMARMFTQQDSVSNTNRVVGTYGYMSPEYAMEGVFSTKSDVYSFGVLMLEIVCGRKNTSFYDDDHPINLIGHVWELWKDDKCVESVDPSLMESLDSDDVQRCIHAGLLCVEHYANDRPTMSDVISMLTNKSERVSLPKRPAFYVQREMLNENLSSAGLCTASTVEITTSLEIELSQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00534 614 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 315 425 - -
Viun11g00534 614 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 437 599 - -
Viun11g00534 614 Gene3D Phosphorylase Kinase; domain 1 310 420 - -
Viun11g00534 614 ProSiteProfiles Protein kinase domain profile. 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00534 614 SUPERFAMILY Protein kinase-like (PK-like) 335 586 IPR011009 -
Viun11g00534 614 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 444 570 - -
Viun11g00534 614 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 144 IPR036426 -
Viun11g00534 614 Pfam Protein tyrosine and serine/threonine kinase 437 540 IPR001245 GO:0004672|GO:0006468
Viun11g00534 614 Pfam Protein tyrosine and serine/threonine kinase 353 435 IPR001245 GO:0004672|GO:0006468
Viun11g00534 614 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Viun11g00534 614 SMART blect_4 36 145 IPR001480 -
Viun11g00534 614 Gene3D Transferase(Phosphotransferase) domain 1 421 572 - -
Viun11g00534 614 Gene3D - 23 152 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00534 Viun-Chr11 5355037 5358004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00534 310 583 Receptor kinase-like Gene Family AT4G11480 44.411 9.20e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00534 PK_Tyr_Ser-Thr 2.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00534 - - vun:114169229 1191.02