Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00532 ATGTTGAACCCATTCGGTGCATATTGTTACATTGCCGGGCGAGAACCGAAGATGGTGAGTTGTAAACCTCAAAATTTTGTGTATGCTTTGAGCTTCTGGTGGTGGATCACTTGTAACCACGTTACCTCCCAAAAGAACAGTTTGAAGCCTGGAGAAAATCTGAGTTCCTGGGGCCTGGTTCGTTCTGAAAACGGTTATGGCCTTGGGTTTCAAACACTTGACAACTGCTGTTACTTGATCATATCAGGTTTAGCCCCCAAATATGAGTATTGGCCGGCTTGGGTTGGTAATAGAAATCAACCTGTTGACAGGCATGCAAGGCTGTTGCTAAGCCGCTCCGGTGTGCTGAAAATAGAATCCAAACATAGTAAACCCATCATCCTTTATTCTTCACCACAACCTTCCAAAAACACTGTGGCCACCTTGTTGGACACAGGCAACTTTGTGCTGCAACAACTTCACCCCAATGGAACAAACACTACGCTGTGGCAAAGTTTTGATTACCCTACTGATAATTTGTTCCCTGGGATGAAGTTAGGTGTGAATCACAAGAGTGGTCATAAATGGTCACTGGTTTCGTGGTTGACTTCTGAAAAACCAAGTCTTGGGGCATTTGAACTTGAATGGGAACCCACTGAAAGGGAATTGATCATCAAGCGAAGAGGAAAATTGTGTTGGGCAAGTGGGAAACTGGAAAACGGTGGAGTCATGCACGACACACATTACGTGATTGTCTCAAACGAAAACGAAAGCTACTTCTCAATCACCACTTTCAATGAAGAGCATACAAGATGGGCGCTTTTAGAAACTGGGCAGCTGATAAATCGGAATGGAGTTGATAATAATGTTGCGAGGGCTGATCTGTGTTATGGCTACAACGAAGATGAAGGGTGCCAACGATGGGAGGAGATACCCTTATGTAGGCATCGTGGTGATGTATTTGACAGCAGGGTAGGGTACCCCAATGAAAACATGGCAACCCTTCTAGAAAATTCGAGTTATGGCCTAAGTGATTGTCAGGATATGTGCTGGAGAAACTGCACTTGTTTTGGATTCACATACTTTGATGATGATGATGGAACTGGTTGTGTGTTCTTTCTGTGGAACTCTACGACAGGTACTACTGTTGCAAGTGGGGGCCATAAGTTTTTCGTACTTACAAACAAATCCCATAACAAAGGTAAAAAAATGTGGATATGGATAACTGTTGTATCAGTAGTAGCTGCTCTGTTAATAATCTGTGCAATTGCTCTTGCCATAAAGAAAACTAAAAGTCTGCTTGAAGAGAAAAAAAGAAAAGGGGTGGCTGAGAATAATATGGCAGATTTAGCAACATCAAATAGATTCTCTGATGTCAATGCCGTTGACAATGAATTCAAGATGGTACAAAATCTAAATGTGTTTCACTATACATTAGTATTGGCGGCAACAGACGATTTTTCTCCTGAAAACAAATTAGGGCAAGGAGGATTTGGACCTGTTTATAAGGGAATCCTTCCTTCTGGGCATGAGGTTGCCATAAAAAGACTTTCGAAAACATCAAGACAAGGAATTGTAGAATTCAAAAATGAAGTGGTGCTTATATGTGAACTTCAGCACACGAATCTTGTACAACTACTTGGGTATTGTATTCATGAAGACGAAAGGATTCTGATATATGAGTTCATGTCAAACCAAAGCTTAGATTACTATCTATTTGATTGTAACAGAAGCAAGTTATTGGACTGGAAGAAGCGATTCAATATAATAGGAGGAATCTCTCAAGGATTACTCTACCTTCATAAGTACTCGAGACTAAAAGTAATTCATAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAGAATATGAATCCTAAAATTTCTGATTTTGGATTGGCAAGAATGTTTACACAGGAAGAATCCATGAGAAATACTAGTAGGATTATTGGAACCTATGGTTACATGTCTCCTGAATATGCCATGGAAGGAATTTTTTCTACAAAATCTGATGTATACAGCTTTGGAGTGTTGCTGCTTGAAATTGTTAGTGGGAGAAGAAACACTAGCTTATATGATGTTGATCTCCCTCTTAATCTAATAGGACATGCGTGGGAGTTATGGAAAGAAGGTGAACCTCTCCAATTAGTAGATCCATCATTGAGTGAGTCATTTGATATTGACGAAGTGAAAAGATGCATTCAAGTGGGTCTCTTATGTGTAGCACAATATGCAAATGACAGACCAACAATGTGTGATGTTGTATCAATGTTAACAAATGAAAGTTCAAAACTTAGCTTGCCTCAAAAACCTGCTTTCTATTTGGAAAGAAGTTACTTTGATAACAAAACGTCTTCTGAAGAGTTAAATACTAACTCTATGGAAGAAATTACTACTTCCACCTAA 2385 0.3966 MLNPFGAYCYIAGREPKMVSCKPQNFVYALSFWWWITCNHVTSQKNSLKPGENLSSWGLVRSENGYGLGFQTLDNCCYLIISGLAPKYEYWPAWVGNRNQPVDRHARLLLSRSGVLKIESKHSKPIILYSSPQPSKNTVATLLDTGNFVLQQLHPNGTNTTLWQSFDYPTDNLFPGMKLGVNHKSGHKWSLVSWLTSEKPSLGAFELEWEPTERELIIKRRGKLCWASGKLENGGVMHDTHYVIVSNENESYFSITTFNEEHTRWALLETGQLINRNGVDNNVARADLCYGYNEDEGCQRWEEIPLCRHRGDVFDSRVGYPNENMATLLENSSYGLSDCQDMCWRNCTCFGFTYFDDDDGTGCVFFLWNSTTGTTVASGGHKFFVLTNKSHNKGKKMWIWITVVSVVAALLIICAIALAIKKTKSLLEEKKRKGVAENNMADLATSNRFSDVNAVDNEFKMVQNLNVFHYTLVLAATDDFSPENKLGQGGFGPVYKGILPSGHEVAIKRLSKTSRQGIVEFKNEVVLICELQHTNLVQLLGYCIHEDERILIYEFMSNQSLDYYLFDCNRSKLLDWKKRFNIIGGISQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGLARMFTQEESMRNTSRIIGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIVSGRRNTSLYDVDLPLNLIGHAWELWKEGEPLQLVDPSLSESFDIDEVKRCIQVGLLCVAQYANDRPTMCDVVSMLTNESSKLSLPQKPAFYLERSYFDNKTSSEELNTNSMEEITTST 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00532 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 556 759 - -
Viun11g00532 794 PIRSF SRK 18 289 IPR024171 GO:0004674
Viun11g00532 794 PIRSF SRK 280 794 IPR024171 GO:0004674
Viun11g00532 794 ProSiteProfiles Bulb-type lectin domain profile. 45 163 IPR001480 -
Viun11g00532 794 Gene3D Phosphorylase Kinase; domain 1 438 555 - -
Viun11g00532 794 Pfam Protein tyrosine and serine/threonine kinase 483 698 IPR001245 GO:0004672|GO:0006468
Viun11g00532 794 Pfam PAN-like domain 308 365 IPR003609 -
Viun11g00532 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 197 IPR036426 -
Viun11g00532 794 Gene3D - 43 167 IPR036426 -
Viun11g00532 794 SUPERFAMILY Protein kinase-like (PK-like) 463 779 IPR011009 -
Viun11g00532 794 CDD STKc_IRAK 486 753 - -
Viun11g00532 794 ProSiteProfiles PAN/Apple domain profile. 307 388 IPR003609 -
Viun11g00532 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Viun11g00532 794 SMART blect_4 45 169 IPR001480 -
Viun11g00532 794 SMART serkin_6 480 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00532 794 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 144 778 - -
Viun11g00532 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 444 555 - -
Viun11g00532 794 Pfam D-mannose binding lectin 93 194 IPR001480 -
Viun11g00532 794 Gene3D Transferase(Phosphotransferase) domain 1 556 764 - -
Viun11g00532 794 ProSiteProfiles Protein kinase domain profile. 480 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00532 Viun-Chr11 5335077 5338681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00532 468 786 Receptor kinase-like Gene Family AT3G45860 56.386 1.51e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00532 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00532 - - gmx:100820258 1081.24