Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00531 ATGGCTTGCAGTGAACATAGAAAACTTCATATGTTGCCAATTCTGACCTACTTCTTGTTCTTGTGGTGGATTACCTGTGTTCATGTTGAAGCCACCAGTAATATTTTGAAGCCAGGTGATACCTTGAATGCCACAGAAGGAGCCAAATTGTGTTCAGAAAAGGGTACATATTGCATGTACTTTGGCACAACATATGATGATGAGAATGTTGCAAACTTATATATATATGCTCAAAAGGATGAGTGGGCTGTGTGGACTGCTAACAGAGACCAACCTGTTGACACAAATTCTGCAGTTCTAGCATTGAATCATTCTGGGGTACTCAAAATAGAATCTGCATCTCTGAAGAAACCAATTATTCTGTATTCTCCTCCTCAACCTATCAACAACACTGTGGCCATGTTGTTGGACACAGGCAACTTTGTGCTTCAGCAACTTCACCCCAATGGGTCTAAAATGGGTGTGTTGTGGGAAAGTTTTGATTTTCCCACTGATACTTTGCTGCCAGGGATGAAGTTAGGTGTGAACCTTAAAACTGGTCGGAAATGGTCACTGGTTTCATGGTTGAGTAAGCATCTTCCCACTCCTGGTTCATTCAGCCTTGAATGGGAGCACAAAACAAAGCAGTTGATGATCAAGAAAGAACAAAAGCTTTACTGGGCTGCTGGTGAAAACGAGTTGCAGAACATCATGGGGGAGGCTTATGACAACATCGTGTTTGTCTCAAATGAAAATGAAGCTTACATCACACTGAAAAGTTCTGATGAAGATCTTACAAAATGGACACTGTTGTCCACTGGACAGTTGATAAACAGGAATGGAGGTGATGTTGCAAGGGCTGATCTGTGTTATGGATACAACACAGATGGAGGGTGCAGAAGATGGGAGGATCTACCCTATTGCAGAGATTCTGGTGATGCATTTGAACTGAAGCAAGGTTATGCCAATCTTGACTTGGACTTGAAAAGACATGAAGAAAATTCAAGTTATGGTGTAAATGATTGCCAAGCTATTTGCTGGAGCACCTGCAGCTGTGTTGCATTCACTCATCTTTATGATAATGAAACTGGTTGCACCTTCTTTCTCTGGAATTCAACCAAGGGTACCAATATTGCAAGCGAGGGTGACAAGTTTTACATGCTAGTAAAGACCAACCATAACAAGACACAAAAAAAATGGATATGGCCAATTGTTGCGATAGGAGCTACTATACTCGTAATCTGCCTTTGCCTTCTGTGTTGTAGAGTGTTAAGGAAAAGAAAACATGACCTTGAAGAGCTGAAAACAAAAAGAATGGGGATTGAAAATGAGGATCTTGAAGCTTCCAGCACCTCTTCTTGTGCAGAAAAACTAGAAGTTGTTTTAAAGGAGGAACATGACTTGAAAGTTTTTAAGTATGCATCAATAATGGAGGCCACAAATGACTTTTCATCTGAAAACAAGTTAGGACAAGGTGGTTTTGGACCTGTTTACAAGGGAATTCTATCTACAATGCAAGAAGTTGCTGTGAAGAAACTTTCAAAATCTTCTAGACAAGGTCTAGTGGAATTCAAAAATGAATTAACAGTCATATCTAAACTTCAACACACAAATTTGGTTCAGCTACTCGGTTACTGCATTCACGAAGAAGAGAGGATTTTGATATATGAATACATGCCTAACAAAAGCTTGGACTGCATTTTATTTGATTCTGCACAAAATCAGCTGCTAGATTGGAATAAGCGTTTCAGTGTAATAGAAGGAATTGCTCAAGGATTACTATACCTTCACAAATACTCAAGACACAGAATCATTCACAGAGACTTGAAGGCTAGCAACATACTCCTTGATGAGAATATGAACCCCAAAATTTCTGATTTCGGCATAGCAAAAATGTTCACACAGCAGGATTCTGAATCAAACACAACCAGGATTGTAGGCACTTATGGTTACATGTCTCCTGAATATGCCATGGAAGGGGTTTTCTCAACAAAATCTGATGTGTATAGCTTTGGAGTGTTGCTCTTTGAAATTGTTAGTGGCAAAAGAAACAATAGCTTCTACACTGAAGAAAGACAACTGAATCTAGTAGGACATACATGGGAGCTATGGAAAGAAGGTGAGGTTCTTAAGTTGGTGGATCCATCACTGAATGATTCATTTTCAGAAGATGAAGTGGTGAGATGTGTGCATGCTGGTCTGTTATGTGTGGAAGAAAATGCAGATGATCGCCCTTCTATCTCCAACGTTGTATCTATGTTAACCAACAAAACTAAAGTGACTACTGTGCCTAAAAAACCAGCATATTATGTTAGAACAAAAGTTCTTGGGGAAGAAACATCCACTAAAGAATTTGGTTTAGATTTTTCACACGAGAATTCTCTTAATGTTTGTTCAATTTGA 2382 0.3929 MACSEHRKLHMLPILTYFLFLWWITCVHVEATSNILKPGDTLNATEGAKLCSEKGTYCMYFGTTYDDENVANLYIYAQKDEWAVWTANRDQPVDTNSAVLALNHSGVLKIESASLKKPIILYSPPQPINNTVAMLLDTGNFVLQQLHPNGSKMGVLWESFDFPTDTLLPGMKLGVNLKTGRKWSLVSWLSKHLPTPGSFSLEWEHKTKQLMIKKEQKLYWAAGENELQNIMGEAYDNIVFVSNENEAYITLKSSDEDLTKWTLLSTGQLINRNGGDVARADLCYGYNTDGGCRRWEDLPYCRDSGDAFELKQGYANLDLDLKRHEENSSYGVNDCQAICWSTCSCVAFTHLYDNETGCTFFLWNSTKGTNIASEGDKFYMLVKTNHNKTQKKWIWPIVAIGATILVICLCLLCCRVLRKRKHDLEELKTKRMGIENEDLEASSTSSCAEKLEVVLKEEHDLKVFKYASIMEATNDFSSENKLGQGGFGPVYKGILSTMQEVAVKKLSKSSRQGLVEFKNELTVISKLQHTNLVQLLGYCIHEEERILIYEYMPNKSLDCILFDSAQNQLLDWNKRFSVIEGIAQGLLYLHKYSRHRIIHRDLKASNILLDENMNPKISDFGIAKMFTQQDSESNTTRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLFEIVSGKRNNSFYTEERQLNLVGHTWELWKEGEVLKLVDPSLNDSFSEDEVVRCVHAGLLCVEENADDRPSISNVVSMLTNKTKVTTVPKKPAYYVRTKVLGEETSTKEFGLDFSHENSLNVCSI 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00531 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Viun11g00531 793 PIRSF SRK 278 792 IPR024171 GO:0004674
Viun11g00531 793 PIRSF SRK 5 279 IPR024171 GO:0004674
Viun11g00531 793 Pfam Protein tyrosine and serine/threonine kinase 479 747 IPR001245 GO:0004672|GO:0006468
Viun11g00531 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 190 IPR036426 -
Viun11g00531 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 441 551 - -
Viun11g00531 793 SUPERFAMILY Protein kinase-like (PK-like) 460 764 IPR011009 -
Viun11g00531 793 ProSiteProfiles Protein kinase domain profile. 476 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00531 793 ProSiteProfiles PAN/Apple domain profile. 301 384 IPR003609 -
Viun11g00531 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 552 755 - -
Viun11g00531 793 Gene3D Transferase(Phosphotransferase) domain 1 552 763 - -
Viun11g00531 793 SMART serkin_6 476 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00531 793 CDD STKc_IRAK 482 749 - -
Viun11g00531 793 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 224 773 - -
Viun11g00531 793 Pfam PAN-like domain 325 364 IPR003609 -
Viun11g00531 793 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Viun11g00531 793 Gene3D Phosphorylase Kinase; domain 1 437 551 - -
Viun11g00531 793 Gene3D - 27 160 IPR036426 -
Viun11g00531 793 SMART blect_4 33 163 IPR001480 -
Viun11g00531 793 Coils Coil 417 437 - -
Viun11g00531 793 Pfam D-mannose binding lectin 84 188 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00531 Viun-Chr11 5299160 5303326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00531 397 766 Receptor kinase-like Gene Family AT4G23230 52.432 8.23e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00531 PK_Tyr_Ser-Thr 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00531 - - vra:106778432 1400.96