Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00528 ATGGAACCTAGAAATGAGGAGTTCCAGCCGGGATCTCAATCAGTAATTCAGGACCATATGGATGGCATGCATAGTATTAGACGACCATCTGACTATAGCACATCAGATGTTAAACCGGTACTTAATTATTCAATACAGACGGGTGAGGAATTTGCTCTTGAATTCATGCGGGATAGGGTGAATCTCAGGAAGCCCATGTTTTCAAATGTTAGTGATTCCAATTCCAATTATGCAACTGGTTGCATGGAACTGAAAGGTGTCTTAGGCATCAACCATGCAGCTTCTGAAAGTGGATCAGACATTTCTGTGCTATCAAAAACTGAGAAAGGTCCGACAGAGTTTAACAGACCGAGTACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGGTCAATACCAAGAGTTTCACTGAATCAAGAGAATAGTCGATTTGTACGTGGGTATGGGTCTTCTGTTGGTTCTGACAGCTCGACAATGATGAAGTGTCTTTGTAGCTTTGGTGGCAGAATATTACCACGACCAAGTGATGGGAAGTTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAAAAAGCATTGTTAATCTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCAGTGTCGTCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAGCGCTCAAAAAAGCTTAGGCTGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCATTTTTCTCTCAGCAGCATTAGTGATGACTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGATCAATAAACAGCTCAACCCCACTTGGTGTCAGTTTCTCAGCTGATGATCTGCATGAATTGGAAAGGCAAACTTCACATCGAGAGACTAATAATAGAGCTGCTGTAGAATCTGTAGGTGCCAGTGCTCCCTTGACTAACAAATCTGATCCTTCATTGACTATTCATTCTTCACAAGCAATTCTACCAAATGCCTCAAATTCTTATGAACTTGATCAACTTTCTTATGGTGACCAAATGCCTCAATTTGGGGAATATAGTCGTCAATATTTTGTTCACCATGGCCTTAATTCCACTCATAACCCTGTTGGAGAGACTTTTATTCCCATGGCTCCTCATCTGCTTAACAATCAACAAGGGGTTCAGAATGAAGACCATCTATCTAGTGGATTACAAATTCAAAATTCTCAGTTATCTGCAATGCAGGTGAAAAAGATAAGTGATAATTCAGTTAAGCAAGGGAGTGACTCTGAAAAAGTTTTAACCTCAGAAACCACGTCTCCAGCTCCCGTACAAACCTTTGACAGTGGCTTAAAAAGTAATTTTCCTGAAGCATCGGTTGCAGTTACCATGCCTGAGGGACATCCACCTTCATTACCTTCAACAAAAAAGGTTCAGCACAAGGATTATGAAGAGTTGTCTTCTACTTCTAGCAGTGCATTTGTTCCGACTTATGTTGATTCCCATCCAAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTGAAAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTAGAGTTGCTAAATCGTTCCTCAAAGTCAGATGACACACACAGTTCTCAAATTCATGTGTCAGATTTACTTTCTGATGTCAACCCAGAGGACCCAGTAATAGAATCTGGGGGCAACTTGCATCCAACTGACGAATTGGTTAATACAGAAAAGCCCTTGCATGCAGATGGCCATACCACTGACAATGGGTTTTCCAAAAATCAAATGAGCAAACCGTTGCCTGATACAAACAGTCTTATTAAGTCAAAACTATCTGAGCTCACAGACCCTGAATTGAAGCCAGTGTTGTCAAGTAATGAAGGAACTAAAGATGTTGAAACTGAAAATTATCGCAAAGATAGCCAAACCAAGCCCTTGTTTGATGAAACTGAAACCAAGACCAAAACCAAAGATGGTAAATCAGATCTTCCTACTTTGCATCATGTTTCCTCTGCTAAGCGTCTTGATGATCTAGCTTCCAATCTTCCAGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCTAATGATGGTTCTGTGGGGCAAGAACTACCTGTATCTGTAACTGGGAGCGTAACTAAAGATGTTAATCAAGATTTCCCCCAAAATGTTGTTTCCAAACAATCTCAAGGGGACATTCTTATTGACATTGATGATCGTTTTCCCCGGGAATTGCTTTCAGACATGTTTTCTAAAGCAATACATGGAGAAGATCCCTCCAGTCTGCATCCATTGTCTGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCCAAAAGATGGTCATATTTTCATAAATTAGCACAAGGGCTTGATAATGTCTCTCTTATTGATCAAGATCATCTTGGTTTTCCACCTGGGATAGGAAAAACAGAAGATAGTAGAACACATCATGTTATGCCGCTAACAACTGATGGAGATCCCCTACATCATGAAGATTCCCATCTCAAATTTAATGAAGAAAATCCTGAGGACTTGCATTTAAGGATTGAAACTGAAACTACCATTCTGAAGTCTAATTATAATCAATCCCAACTTAAGGACAATGAGAGTATGCAGTTTGATGCTATGATGGAAAATCTAAGAATGCAAGGGTCAGAGTTTGAGGATGGCAAATTTGATGTGAAAAATAGCAACCTACCTCCACCCCTTGATCCTTCTTTGGGAGATATTGACATTAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAGGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACCGTGTACCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCTGCTTTTGGAATGGAATATTTGCACTCGAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGCGAAATACTTTGGTTACTGGTGGTGTGCGTGGGACACTACCTTGGATGGCACCAGAGCTTCTGAATGGCAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTATTATGGGAAATTCTTACCGGTGAGGAGCCATATGCCAACATGCATTATGGTGCAATTATAGGTGGAATTGTAAATAACACATTAAGGCCAACCATCCCTAGTAACTGTGATCCTGAATGGAGAACCCTGATGGAACAATGCTGGGCTCCCAATCCTGCTGTCAGACCATCCTTCACAGAAATTGCCAGTCGTTTGCGCATAATGTCTGCAGCAGCAAGCCAAACCAAAACACAGGGCCATAAAACTTCAAAATGA 3699 0.4079 MEPRNEEFQPGSQSVIQDHMDGMHSIRRPSDYSTSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPMFSNVSDSNSNYATGCMELKGVLGINHAASESGSDISVLSKTEKGPTEFNRPSTSLHGDRSNYGSIRSIPRVSLNQENSRFVRGYGSSVGSDSSTMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSKKLRLFLFSMSDLEDAHFSLSSISDDSEVQYVVAVNGMDFGSINSSTPLGVSFSADDLHELERQTSHRETNNRAAVESVGASAPLTNKSDPSLTIHSSQAILPNASNSYELDQLSYGDQMPQFGEYSRQYFVHHGLNSTHNPVGETFIPMAPHLLNNQQGVQNEDHLSSGLQIQNSQLSAMQVKKISDNSVKQGSDSEKVLTSETTSPAPVQTFDSGLKSNFPEASVAVTMPEGHPPSLPSTKKVQHKDYEELSSTSSSAFVPTYVDSHPNAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQIHVSDLLSDVNPEDPVIESGGNLHPTDELVNTEKPLHADGHTTDNGFSKNQMSKPLPDTNSLIKSKLSELTDPELKPVLSSNEGTKDVETENYRKDSQTKPLFDETETKTKTKDGKSDLPTLHHVSSAKRLDDLASNLPEIDWGEASGKESNDGSVGQELPVSVTGSVTKDVNQDFPQNVVSKQSQGDILIDIDDRFPRELLSDMFSKAIHGEDPSSLHPLSGDGVGLSINMENHEPKRWSYFHKLAQGLDNVSLIDQDHLGFPPGIGKTEDSRTHHVMPLTTDGDPLHHEDSHLKFNEENPEDLHLRIETETTILKSNYNQSQLKDNESMQFDAMMENLRMQGSEFEDGKFDVKNSNLPPPLDPSLGDIDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDPEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSAAASQTKTQGHKTSK 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00528 1232 MobiDBLite consensus disorder prediction 552 566 - -
Viun11g00528 1232 CDD PB1_UP2 165 261 - -
Viun11g00528 1232 PANTHER SERINE-THREONINE PROTEIN KINASE 213 1214 - -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 640 690 - -
Viun11g00528 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1075 1087 IPR008271 GO:0004672|GO:0006468
Viun11g00528 1232 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 181 263 - -
Viun11g00528 1232 SUPERFAMILY CAD & PB1 domains 177 265 - -
Viun11g00528 1232 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1038 1230 - -
Viun11g00528 1232 ProSiteProfiles Protein kinase domain profile. 950 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00528 1232 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 943 1037 - -
Viun11g00528 1232 SUPERFAMILY Protein kinase-like (PK-like) 939 1213 IPR011009 -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 552 627 - -
Viun11g00528 1232 Pfam Protein tyrosine and serine/threonine kinase 951 1213 IPR001245 GO:0004672|GO:0006468
Viun11g00528 1232 MobiDBLite consensus disorder prediction 324 343 - -
Viun11g00528 1232 ProSitePatterns Protein kinases ATP-binding region signature. 956 981 IPR017441 GO:0005524
Viun11g00528 1232 SMART PB1_new 176 263 IPR000270 GO:0005515
Viun11g00528 1232 MobiDBLite consensus disorder prediction 439 508 - -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 654 690 - -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 439 473 - -
Viun11g00528 1232 Gene3D Transferase(Phosphotransferase) domain 1 1038 1232 - -
Viun11g00528 1232 Gene3D Phosphorylase Kinase; domain 1 943 1037 - -
Viun11g00528 1232 PRINTS Tyrosine kinase catalytic domain signature 1184 1206 IPR001245 GO:0004672|GO:0006468
Viun11g00528 1232 PRINTS Tyrosine kinase catalytic domain signature 1069 1087 IPR001245 GO:0004672|GO:0006468
Viun11g00528 1232 PRINTS Tyrosine kinase catalytic domain signature 1140 1162 IPR001245 GO:0004672|GO:0006468
Viun11g00528 1232 PRINTS Tyrosine kinase catalytic domain signature 1032 1045 IPR001245 GO:0004672|GO:0006468
Viun11g00528 1232 CDD STKc_MAP3K-like 956 1213 - -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 316 343 - -
Viun11g00528 1232 SMART serkin_6 950 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00528 1232 Gene3D - 180 263 - -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 610 627 - -
Viun11g00528 1232 MobiDBLite consensus disorder prediction 99 126 - -
Viun11g00528 1232 Pfam PB1 domain 178 261 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00528 Viun-Chr11 5211170 5222574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00528 35 598 MAP Kinase Kinase Kinase AT1G16270 37.049 3.47e-86 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Viun11g00528 PK_Tyr_Ser-Thr 3.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00528 - - gmx:100817937 2086.23