Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00527 | ATGATGGAACAGTCTAGATTCTACAAACATCTTCAATGCAATAGCATGGAACCTAGAAATGAGGAGTTCCAGCCGGGATCTCAATCAGTAATTCAGGACCATATGGATGGCATGCATAGTATTAGACGACCATCTGACTATAGCACATCAGATGTTAAACCGGTACTTAATTATTCAATACAGACGGGTGAGGAATTTGCTCTTGAATTCATGCGGGATAGGGTGAATCTCAGGAAGCCCATGTTTTCAAATGTTAGTGATTCCAATTCCAATTATGCAACTGGTTGCATGGAACTGAAAGGTGTCTTAGGCATCAACCATGCAGCTTCTGAAAGTGGATCAGACATTTCTGTGCTATCAAAAACTGAGAAAGGTCCGACAGAGTTTAACAGACCGAGTACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGGTCAATACCAAGAGTTTCACTGAATCAAGAGAATAGTCGATTTGTACGTGGGTATGGGTCTTCTGTTGGTTCTGACAGCTCGACAATGATGAAGTGTCTTTGTAGCTTTGGTGGCAGAATATTACCACGACCAAGTGATGGGAAGTTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAAAAAGCATTGTTAATCTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCAGTGTCGTCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAGCGCTCAAAAAAGCTTAGGCTGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCATTTTTCTCTCAGCAGCATTAGTGATGACTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGATCAATAAACAGCTCAACCCCACTTGGTGTCAGTTTCTCAGCTGATGATCTGCATGAATTGGAAAGGCAAACTTCACATCGAGAGACTAATAATAGAGCTGCTGTAGAATCTGTAGGTGCCAGTGCTCCCTTGACTAACAAATCTGATCCTTCATTGACTATTCATTCTTCACAAGCAATTCTACCAAATGCCTCAAATTCTTATGAACTTGATCAACTTTCTTATGGTGACCAAATGCCTCAATTTGGGGAATATAGTCGTCAATATTTTGTTCACCATGGCCTTAATTCCACTCATAACCCTGTTGGAGAGACTTTTATTCCCATGGCTCCTCATCTGCTTAACAATCAACAAGGGGTTCAGAATGAAGACCATCTATCTAGTGGATTACAAATTCAAAATTCTCAGTTATCTGCAATGCAGGTGAAAAAGATAAGTGATAATTCAGTTAAGCAAGGGAGTGACTCTGAAAAAGTTTTAACCTCAGAAACCACGTCTCCAGCTCCCGTACAAACCTTTGACAGTGGCTTAAAAAGTAATTTTCCTGAAGCATCGGTTGCAGTTACCATGCCTGAGGGACATCCACCTTCATTACCTTCAACAAAAAAGGTTCAGCACAAGGATTATGAAGAGTTGTCTTCTACTTCTAGCAGTGCATTTGTTCCGACTTATGTTGATTCCCATCCAAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTGAAAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTAGAGTTGCTAAATCGTTCCTCAAAGTCAGATGACACACACAGTTCTCAAATTCATGTGTCAGATTTACTTTCTGATGTCAACCCAGAGGACCCAGTAATAGAATCTGGGGGCAACTTGCATCCAACTGACGAATTGGTTAATACAGAAAAGCCCTTGCATGCAGATGGCCATACCACTGACAATGGGTTTTCCAAAAATCAAATGAGCAAACCGTTGCCTGATACAAACAGTCTTATTAAGTCAAAACTATCTGAGCTCACAGACCCTGAATTGAAGCCAGTGTTGTCAAGTAATGAAGGAACTAAAGATGTTGAAACTGAAAATTATCGCAAAGATAGCCAAACCAAGCCCTTGTTTGATGAAACTGAAACCAAGACCAAAACCAAAGATGGTAAATCAGATCTTCCTACTTTGCATCATGTTTCCTCTGCTAAGCGTCTTGATGATCTAGCTTCCAATCTTCCAGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCTAATGATGGTTCTGTGGGGCAAGAACTACCTGTATCTGTAACTGGGAGCGTAACTAAAGATGTTAATCAAGATTTCCCCCAAAATGTTGTTTCCAAACAATCTCAAGGGGACATTCTTATTGACATTGATGATCGTTTTCCCCGGGAATTGCTTTCAGACATGTTTTCTAAAGCAATACATGGAGAAGATCCCTCCAGTCTGCATCCATTGTCTGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCCAAAAGATGGTCATATTTTCATAAATTAGCACAAGGGCTTGATAATGTCTCTCTTATTGATCAAGATCATCTTGGTTTTCCACCTGGGATAGGAAAAACAGAAGATAGTAGAACACATCATGTTATGCCGCTAACAACTGATGGAGATCCCCTACATCATGAAGATTCCCATCTCAAATTTAATGAAGAAAATCCTGAGGACTTGCATTTAAGGATTGAAACTGAAACTACCATTCTGAAGTCTAATTATAATCAATCCCAACTTAAGGACAATGAGAGTATGCAGTTTGATGCTATGATGGAAAATCTAAGAATGCAAGGGTCAGAGTTTGAGGATGGCAAATTTGATGTGAAAAATAGCAACCTACCTCCACCCCTTGATCCTTCTTTGGGAGATATTGACATTAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAGGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACCGTGTACCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCTGCTTTTGGAATGGAATATTTGCACTCGAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGCGAAATACTTTGGTTACTGGTGGTGTGCGTGGGACACTACCTTGGATGGCACCAGAGCTTCTGAATGGCAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTATTATGGGAAATTCTTACCGGTGAGGAGCCATATGCCAACATGCATTATGGTGCAATTATAGGTGGAATTGTAAATAACACATTAAGGCCAACCATCCCTAGTAACTGTGATCCTGAATGGAGAACCCTGATGGAACAATGCTGGGCTCCCAATCCTGCTGTCAGACCATCCTTCACAGAAATTGCCAGTCGTTTGCGCATAATGTCTGCAGCAGCAAGCCAAACCAAAACACAGGGCCATAAAACTTCAAAATGA | 3744 | 0.4073 | MMEQSRFYKHLQCNSMEPRNEEFQPGSQSVIQDHMDGMHSIRRPSDYSTSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPMFSNVSDSNSNYATGCMELKGVLGINHAASESGSDISVLSKTEKGPTEFNRPSTSLHGDRSNYGSIRSIPRVSLNQENSRFVRGYGSSVGSDSSTMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSKKLRLFLFSMSDLEDAHFSLSSISDDSEVQYVVAVNGMDFGSINSSTPLGVSFSADDLHELERQTSHRETNNRAAVESVGASAPLTNKSDPSLTIHSSQAILPNASNSYELDQLSYGDQMPQFGEYSRQYFVHHGLNSTHNPVGETFIPMAPHLLNNQQGVQNEDHLSSGLQIQNSQLSAMQVKKISDNSVKQGSDSEKVLTSETTSPAPVQTFDSGLKSNFPEASVAVTMPEGHPPSLPSTKKVQHKDYEELSSTSSSAFVPTYVDSHPNAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQIHVSDLLSDVNPEDPVIESGGNLHPTDELVNTEKPLHADGHTTDNGFSKNQMSKPLPDTNSLIKSKLSELTDPELKPVLSSNEGTKDVETENYRKDSQTKPLFDETETKTKTKDGKSDLPTLHHVSSAKRLDDLASNLPEIDWGEASGKESNDGSVGQELPVSVTGSVTKDVNQDFPQNVVSKQSQGDILIDIDDRFPRELLSDMFSKAIHGEDPSSLHPLSGDGVGLSINMENHEPKRWSYFHKLAQGLDNVSLIDQDHLGFPPGIGKTEDSRTHHVMPLTTDGDPLHHEDSHLKFNEENPEDLHLRIETETTILKSNYNQSQLKDNESMQFDAMMENLRMQGSEFEDGKFDVKNSNLPPPLDPSLGDIDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDPEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSAAASQTKTQGHKTSK | 1247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 625 | 642 | - | - | |
Viun11g00527 | 1247 | PRINTS | Tyrosine kinase catalytic domain signature | 1199 | 1221 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00527 | 1247 | PRINTS | Tyrosine kinase catalytic domain signature | 1084 | 1102 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00527 | 1247 | PRINTS | Tyrosine kinase catalytic domain signature | 1155 | 1177 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00527 | 1247 | PRINTS | Tyrosine kinase catalytic domain signature | 1047 | 1060 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00527 | 1247 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1090 | 1102 | IPR008271 | GO:0004672|GO:0006468 | |
Viun11g00527 | 1247 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 196 | 278 | - | - | |
Viun11g00527 | 1247 | ProSiteProfiles | Protein kinase domain profile. | 965 | 1230 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 331 | 358 | - | - | |
Viun11g00527 | 1247 | Pfam | Protein tyrosine and serine/threonine kinase | 966 | 1228 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 655 | 705 | - | - | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 114 | 141 | - | - | |
Viun11g00527 | 1247 | ProSitePatterns | Protein kinases ATP-binding region signature. | 971 | 996 | IPR017441 | GO:0005524 | |
Viun11g00527 | 1247 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1053 | 1245 | - | - | |
Viun11g00527 | 1247 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1053 | 1247 | - | - | |
Viun11g00527 | 1247 | CDD | STKc_MAP3K-like | 971 | 1228 | - | - | |
Viun11g00527 | 1247 | Gene3D | - | 195 | 278 | - | - | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 567 | 581 | - | - | |
Viun11g00527 | 1247 | CDD | PB1_UP2 | 180 | 276 | - | - | |
Viun11g00527 | 1247 | SMART | serkin_6 | 965 | 1231 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 567 | 642 | - | - | |
Viun11g00527 | 1247 | SUPERFAMILY | Protein kinase-like (PK-like) | 954 | 1228 | IPR011009 | - | |
Viun11g00527 | 1247 | SMART | PB1_new | 191 | 278 | IPR000270 | GO:0005515 | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 454 | 517 | - | - | |
Viun11g00527 | 1247 | SUPERFAMILY | CAD & PB1 domains | 192 | 280 | - | - | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 339 | 358 | - | - | |
Viun11g00527 | 1247 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 221 | 1229 | - | - | |
Viun11g00527 | 1247 | Gene3D | Phosphorylase Kinase; domain 1 | 958 | 1052 | - | - | |
Viun11g00527 | 1247 | Pfam | PB1 domain | 193 | 276 | IPR000270 | GO:0005515 | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 454 | 488 | - | - | |
Viun11g00527 | 1247 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 958 | 1052 | - | - | |
Viun11g00527 | 1247 | MobiDBLite | consensus disorder prediction | 669 | 705 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00527 | Viun-Chr11 | 5211170 | 5222576 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g00527 | 50 | 613 | MAP Kinase Kinase Kinase | AT1G16270 | 37.049 | 4.70e-86 | 303 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-6 | Viun11g00527 | PK_Tyr_Ser-Thr | 3.3e-62 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g00527 | - | - | gmx:100817937 | 2109.72 |