Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00518 ATGGAGGACGATGAACAAAACAACGTTATGGGTTTGGAGGACATAACTTTATTACACATAGAGGGGGGTACAAGAAGTGTGACTCAAGAGCACTGCAATGATGACTACCATCATTCAAAGCACTTTGATGAAGTTTTATGTCCATATGTTGGGATGATTTTTGAAAGTGCTGATGAAGTGAAGAATTATTACAGAGAGTACGCAATTAAATCGGGTTTTGGAATTAGAATAAGAACATCTAAAAAGGACGTTGACAACCAAATGTGTTACTTAAAGTTAGTTTGTTCCCGTGAGGGGAAATGTGTGTCTTCCATTGCACCTGAAATGAAGACTCTTCCAACACAAAGAAAGCAATGTCTAGCACGCATGACAACAGTTCGAAAGCAAGATATGTGGATGATTAGCAGTGTGGTAGATGAACATAACCATGACGTTAGTCCAACAAAATCCAGGCTTATTCGTGGGAATAGAAAGCTGAATATGCAAGTCAAAAGGACCCTTGACCTAAATGACCAAGCCGGTGTTCGCATTAATAAGAGCTTTCGGTCCTTGGTGTATGATGCAGGGGGATTTGAAAATTTACAATTTGTGGAACGAGACGCTAGGAACTACATTGGTAAGCAAAGACGTGCATTAGGGAAGGAAGGTGACGGACAAGCTTTGTTAAACCACTTTTCAACTATGAGGGAATTGAACAAAGATTTCTTTTTTGAAATTGATATGGATCCAGATAATCGCATTAGCAACGTATTTTGGGCTGATGCTAGGAGTAGGGTTGCCTTTATGGAGTTTGGGGATGTTGTATCATTTGATACAACGTACTTAACCAATAAGTACGACATGCCATTTGCACCATTTGTTGGGGTTAATCACCATGGTCATTCAATCTTACTAGGTTGTGGACTTCTATCTGCAAAAGACAGTAGTACATTTGTGTGGCTATTTCGATGTTGGTTGCGATACATGGGAAATAAATCCCCTGAAGGCATTGTCACTGATCAGTGCAAGGCTATGCAAAATGCAATCCAAATGGTCTTCCCCAACACACGACATCGTTGGTGCCTTTGGCACATAATGAAGAAACTTCCCAAAAAATTGATTGGTTATACAAACTACAAGGAAATCAAGCATACCATGAAGCAATTGGTGTATGAATCATCTACTGCAGAGGATTTTGAGAGTGGATGGAATAATTTCATTGAACTGTATGACCTACAACTAAATGAATGGTTGCACACCCTATTTGAAGAAAGACATCGATGGGTGCCATGTTATTTGAAATGTGATTTTTGGGCTGGCATGTCGACAACACAAAGAAGTGAGGGGATGAACGCCTTCTTTGATGGGTTTATTAACTCTACAACCACACTCCAACAATTTGTGGTTCAATATGACAACGCCCTTCGTTCCAAGGCAGAGAAGGAGTACGAGGCGGACTTCAGTTCTCTTAATACTACCATTCCCTATGGATCTCAATCATTTATCAAGAGGCAATTTCAGGAGGAATACACTCATGCAAAATTTGGGGAAGTGCAAAACGAATTTCGGTGCAAAATGAACTGTAACGTGAAAAATGTTGCATTTGATGGGATTAGGACAAAATATTTTGTCAAAGAAGCTTTGATATGGAAAGATGAAAGTGCAGACAAGATGCATGAAATTATATTTGATCCTTCAACAAAAGACATTGAATGCCCTTGTCGACTGTTTGAGTTTAGAGGTATTCTTTGTCGACACAGCCTAATGGTCCTTGCACAAGAAGATGTTAGATGTGTTTCACAAAAGTATATTCTTGGTCGGTGGAGCAAACGGATACGTAGAAGGCATACTTTGATACGAGCATCATACAACACTAAGAAAGACGAACCAAATGTTAAGAGGTATGACTTTTTGTATAAGAAATTTTATGACATTGCTGAGGTTGCATGTGAAAGTCAAAGTGGAACAGACTTCCTTGTTGACCAACTGGAGTCGTTGTCAAAAAATGCATCCATAAGAGATGCGGGAGCAACTTCATTAGGGGCTCAAAAAGACATGTCTTCTACACCTAATACTGCGGTTGAACACAACAATATACTAAGCCCAGCCCATGTGAAAAGAAAGGGTCGACCACGAGGATTAAGGATGCAATCAACCGTTGAAAAGATTGGCAAAAAAAAGATACGTAAGGCTGCAAGGAAAAAAGCATGTAGGGATGGAATCTCAGTCCATCACGGTGACCTTGGGACTTCTACTAAACAATCTACTGGTGCAGAAAGGCATGGAAGAGATATAAACATGGAACTAGTTTGCAAAGAAAATCTACTTTTGGATTGGTTGACCTAA 2325 0.397 MEDDEQNNVMGLEDITLLHIEGGTRSVTQEHCNDDYHHSKHFDEVLCPYVGMIFESADEVKNYYREYAIKSGFGIRIRTSKKDVDNQMCYLKLVCSREGKCVSSIAPEMKTLPTQRKQCLARMTTVRKQDMWMISSVVDEHNHDVSPTKSRLIRGNRKLNMQVKRTLDLNDQAGVRINKSFRSLVYDAGGFENLQFVERDARNYIGKQRRALGKEGDGQALLNHFSTMRELNKDFFFEIDMDPDNRISNVFWADARSRVAFMEFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCGLLSAKDSSTFVWLFRCWLRYMGNKSPEGIVTDQCKAMQNAIQMVFPNTRHRWCLWHIMKKLPKKLIGYTNYKEIKHTMKQLVYESSTAEDFESGWNNFIELYDLQLNEWLHTLFEERHRWVPCYLKCDFWAGMSTTQRSEGMNAFFDGFINSTTTLQQFVVQYDNALRSKAEKEYEADFSSLNTTIPYGSQSFIKRQFQEEYTHAKFGEVQNEFRCKMNCNVKNVAFDGIRTKYFVKEALIWKDESADKMHEIIFDPSTKDIECPCRLFEFRGILCRHSLMVLAQEDVRCVSQKYILGRWSKRIRRRHTLIRASYNTKKDEPNVKRYDFLYKKFYDIAEVACESQSGTDFLVDQLESLSKNASIRDAGATSLGAQKDMSSTPNTAVEHNNILSPAHVKRKGRPRGLRMQSTVEKIGKKKIRKAARKKACRDGISVHHGDLGTSTKQSTGAERHGRDINMELVCKENLLLDWLT 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00518 774 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Viun11g00518 774 PANTHER OS01G0519700 PROTEIN 44 735 - -
Viun11g00518 774 Pfam FAR1 DNA-binding domain 62 146 IPR004330 -
Viun11g00518 774 SMART 26again6 563 590 IPR006564 GO:0008270
Viun11g00518 774 Pfam MULE transposase domain 267 361 IPR018289 -
Viun11g00518 774 Pfam SWIM zinc finger 561 584 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00518 Viun-Chr11 5069053 5071626 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun11g00518 MULE 1.4e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00518 - - vun:114180824 910.983