Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00511 | ATGAGCGAAGAACATAGAAACGTTGCATGTGTGTTGTGTAGGTATCAACATAGACGTCACGATGGTAGTTGTGAATTTGGACAGTATTTTGCGAGCAACAGGTCAATAGAGTTTGAGAATGCTTGCAAGCTTTTTGGTTTGGCAAATTTACTTAGATTGATGCGTAGTGTTGAAGCATCTGAAAGACAAGTTATGGCTGATTCCATTCTAATTGAGGGTAACATGTGGAGCAATGATCCCATTCATGGTGCCTTAGGTCATGTCCTTACTTTGAACAATCAAATCCAATCTGTTCAGAGAGAGTTACAAATTGTAAACACTATGCTAGCTCAATGCCCACTTCATACAACTTCACATGTTGCAAACACCGCTGTGGGTGATGTTGCTGGTTCTTCTCACACCGGACAATCAAGTGTTGTTCCGTCTCTTGAGAAAGAGGATGCTGCTCAAGAGAATGATGATGAGGTTAAGAGAAAGAATAAAAGAAAGCATTGA | 495 | 0.404 | MSEEHRNVACVLCRYQHRRHDGSCEFGQYFASNRSIEFENACKLFGLANLLRLMRSVEASERQVMADSILIEGNMWSNDPIHGALGHVLTLNNQIQSVQRELQIVNTMLAQCPLHTTSHVANTAVGDVAGSSHTGQSSVVPSLEKEDAAQENDDEVKRKNKRKH | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00511 | 164 | ProSiteProfiles | LOB domain profile. | 8 | 109 | IPR004883 | - | |
Viun11g00511 | 164 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 9 | 151 | - | - | |
Viun11g00511 | 164 | MobiDBLite | consensus disorder prediction | 127 | 164 | - | - | |
Viun11g00511 | 164 | MobiDBLite | consensus disorder prediction | 127 | 143 | - | - | |
Viun11g00511 | 164 | Pfam | Lateral organ boundaries (LOB) domain | 9 | 106 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00511 | Viun-Chr11 | 4938118 | 4939093 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g00511 | 6 | 96 | AS2 family | AT2G19820 | 38.043 | 2.56e-21 | 82.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Viun11g00511 | LOB | 9.9e-23 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g00511 | - | - | pvu:PHAVU_011G178700g | 200.675 |