Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00505 ATGAGGGGGGAAATACAAGTTGACTTACGCATAGGAAAGGAAGACTCAACTTGGGGAAGTGGTTCTGATCTTGCTTCAGCCCTAAATTCTGCAACAGGGAAGAGGATTAGACCTACTGCAGTAATTCTTTGGGTGAATTTGGTAGAGAGAAGGCAGAGAAAAAAAAGTGCAGTGGCGAAGAAGCTGGATATGATTAAAGATATTGATGGTAAGAGGAAAACTCTAAAGCTGGCAGTTAAAGTTGTTGATCATTGGTATGTTCAGTCTCGTGATTCTACTCTTCAGTTGGAGATGATTCTGATGGATGAAAATGCGGACAAAATACATTGCATTGTTCGCAGGGAGGAGTTTGACTTATGGGATAGCAAGTTGATTGAGGGAGAAACATATATCATGCACAATTTCAAGATACTGAAAAATGAAGGACAATACAGAGTATGTGAGCATCCTTACAAGTTATTGTTTATTGGTGCTACATCCGTGAAGTCGCAAGCTATTGCTAAACTTCCAACGAAGGCTTACACCTTTAAAAGTATTAAAGAGATTGTTAGTGGCAATTTTATTCCTGACTTGCTTATAGATTTGATTGGTGTGGTTGAGAATGTGAGAATCAAGCCTCAGTTCAAAAATGTAGACTCAAAGAATGTGGTGTTTACTTTGGTGGATCTGAGTGGTGCTGCAATTTGTTGTACATTGTGGGATGATTATTGCAAGAAGTTTGTACAGATGTTTAATGAGCTACCTAATTCGGAGAAGCTTGTGGTTATCATTACTCAAGCTAAAATCAAACCAGCTGCAGGTGAATGGCCAGTTTTTGTTTCTAATACGTGGAATGATACAAAGTTGATCATGGAAAATGATTTTCCTCAAATAGTTCATTTTAAGAAACGAATGAAAGAAATTGATCCTGATGAAGTGATATTGAGTCAGTGTGCAAGTCAATTGACTCAGTCTTCCCAATATACTGATGCTGAACGTTTTGTATATAAATGTTTAGTGAAAAGTTTGTCTGAAATCCCATCAATGAAGAAGATAATGAGGGCTGATATTATATGGTTTGCAACAATTGCAACAAAAGGACTTATGAAGCAGTTTCTTTCAAGTGCACTTATTGTGATAAGGATAATGCACTGCCTGTTTTCAAGTTGGTATAGGCTCCAAGTCCAGGTCTGTGATGATTCAAACAATTATGCTAACTTTGTTGTATGGGACCAAGAATGTAGCAACATCATTGGGTTGTCTGCTGTTGATTTCCAGAAAATAATGATTGAGGTTGGTGAAGATGAACCCCTTTGCTTTCCTGATGCATTGGATGTAATGCTAGGTTGTACCTTTGCATTTAAAGTTCGAACCCAACCAAGAAATAAGTGTGCATCTGTCATTAAAGTTTCAAATGTTTCAGAAATAGTGGCACATGTTAAAAGTCTTATCCCTCCACTTCAAATTGGTGATAGTAGTGATAAATGCAGTATGAATTTGGTATCTGAGAGTTCCAGTGTTATGATTTCAGAATTACGTGGAAAAGCTATTTGTAATTTGGCTGCAGACACTGATACTGATATAATGAGTTTGAGTGCTACTGGTGATAATGATTCGGATTATGTTGTAATTGGAACTCCAGGAAAGAGGTTATTGCCATGTAGTGAAAATTGCAACGAATCTTCTCAGGACATGGATTCTGCTCAACTATCCAGCACTAAGATGAAGAAGCTTATCAAGAAGGAGAAAACTTAA 1734 0.3737 MRGEIQVDLRIGKEDSTWGSGSDLASALNSATGKRIRPTAVILWVNLVERRQRKKSAVAKKLDMIKDIDGKRKTLKLAVKVVDHWYVQSRDSTLQLEMILMDENADKIHCIVRREEFDLWDSKLIEGETYIMHNFKILKNEGQYRVCEHPYKLLFIGATSVKSQAIAKLPTKAYTFKSIKEIVSGNFIPDLLIDLIGVVENVRIKPQFKNVDSKNVVFTLVDLSGAAICCTLWDDYCKKFVQMFNELPNSEKLVVIITQAKIKPAAGEWPVFVSNTWNDTKLIMENDFPQIVHFKKRMKEIDPDEVILSQCASQLTQSSQYTDAERFVYKCLVKSLSEIPSMKKIMRADIIWFATIATKGLMKQFLSSALIVIRIMHCLFSSWYRLQVQVCDDSNNYANFVVWDQECSNIIGLSAVDFQKIMIEVGEDEPLCFPDALDVMLGCTFAFKVRTQPRNKCASVIKVSNVSEIVAHVKSLIPPLQIGDSSDKCSMNLVSESSSVMISELRGKAICNLAADTDTDIMSLSATGDNDSDYVVIGTPGKRLLPCSENCNESSQDMDSAQLSSTKMKKLIKKEKT 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00505 577 CDD RPA1_DBD_A_like 76 161 - -
Viun11g00505 577 SUPERFAMILY Nucleic acid-binding proteins 174 299 IPR012340 -
Viun11g00505 577 MobiDBLite consensus disorder prediction 553 577 - -
Viun11g00505 577 Gene3D - 60 163 IPR012340 -
Viun11g00505 577 Pfam Domain of unknown function DUF223 97 183 IPR003871 -
Viun11g00505 577 Gene3D - 168 305 IPR012340 -
Viun11g00505 577 MobiDBLite consensus disorder prediction 553 567 - -
Viun11g00505 577 SUPERFAMILY Nucleic acid-binding proteins 64 162 IPR012340 -
Viun11g00505 577 Gene3D - 373 481 IPR012340 -
Viun11g00505 577 CDD RPA1_DBD_B_like 194 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00505 Viun-Chr11 4871473 4875700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00505 72 288 Core DNA Replication Machinery Family AT4G19130 21.778 3.94e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00505 - - vun:114170113 1128.24