Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00499 ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCTACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGAGACTCAGGCCTTGTCCTCACCACAGACCCTAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGCTTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGACAAGGCCACTCCTAAGACAATCATGAGGGTTATGGGTGTGAAGGGTCTCACTCTTTATCATCTCAAGAGTCACCTTCAGAAATTCAGACTTGGAAAACAGCCCCACAAGGATTTCAATGAACACTCTATTAAGGAAGGCATGAGAGCTTCTGCTTTAGAACTTCAACGAAATATTGGCTCCTCTTCCGCCATGATTGGTCGCAACATGAACGAGATGCAAATGGAAGTGCAAAGAAGACTGCATGAACAACTAGAGGTTCAGAAAAACCTTCAACTGAGGATTGAGGCACAGGGAAAATACATGCAAAGCATATTGGAGAAGGCTTATCACACACTTGCAGGTGAAAACATGGGCACAGGCATGAAGGGTATGGGAGGAGGTCAAGGAAGCAGCAGTGACATGGGTGTGATGAAGGAGTTCTGTTCTCTGAATTACCCTTCTTTTCAAGATCTGAACTTGTATGGTGGTGGTGGTGGTGAAAACCTTGAAGGGTTCATGGCATCAAACACTGAGAGTGTTTTTGAGGGAAAGAAGAGGATTTGCAGCTACAGTGGAAGTGGGAAGAGTCCATTGATTTGGAGTGATGATCTGAGGCTTCAAGATTTGGGAACAACTTCATCATGCATCAGCCCTGAAGAGGAGGACCCTTTCAAAGGGGATCACAATAAGGTTCAGATTTCAGCACCATCAATGGATAGTGACCCCATGTCAGAGATCTATGACACAAAGCCATTGATGGTGCATGGAGAGAGTGTAGGTAACAATAGTCACAAGAAATTTGAAGGTTCTATGAAGCTAGAAAAGCCATCACCACAAAGATCACCACTTCAACCAGAAAGGAATAACAGTCCTATGATCAATGCTACTTCCATGGCACAAGGGTTTTGA 1065 0.4469 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNEHSIKEGMRASALELQRNIGSSSAMIGRNMNEMQMEVQRRLHEQLEVQKNLQLRIEAQGKYMQSILEKAYHTLAGENMGTGMKGMGGGQGSSSDMGVMKEFCSLNYPSFQDLNLYGGGGGENLEGFMASNTESVFEGKKRICSYSGSGKSPLIWSDDLRLQDLGTTSSCISPEEEDPFKGDHNKVQISAPSMDSDPMSEIYDTKPLMVHGESVGNNSHKKFEGSMKLEKPSPQRSPLQPERNNSPMINATSMAQGF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00499 354 Gene3D - 34 92 - -
Viun11g00499 354 MobiDBLite consensus disorder prediction 1 20 - -
Viun11g00499 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 209 IPR044848 GO:0003700
Viun11g00499 354 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Viun11g00499 354 FunFam Myb family transcription factor 34 92 - -
Viun11g00499 354 MobiDBLite consensus disorder prediction 333 354 - -
Viun11g00499 354 MobiDBLite consensus disorder prediction 311 354 - -
Viun11g00499 354 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Viun11g00499 354 Pfam MYB-CC type transfactor, LHEQLE motif 131 169 IPR025756 -
Viun11g00499 354 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Viun11g00499 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00499 Viun-Chr11 4805979 4810136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00499 4 340 G2-like Transcription Factor Family AT1G79430 56.011 4.78e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun11g00499 Myb_DNA-binding 4.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00499 - - gmx:100796268 555.058