Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00497 ATGGCTACCTATGATCCTGCTACATCCACAAACTCTACCACAGAGACATTATCAGAAGAAGAACCCAAACGCTCTCCCGATGGATTGTTCTTGTTCACCGTACATATGCTTATAGTGAACAAGCTTGGTCACGGCACACCTCTCACTCTTCATTGCAAATCCAAAAACGATGATCTTCAGGTTCATGTCATTCAATATGACCAAAGTTTCAGGTGGAAATTCCGACCTAATTTTTGGGGAACAACGTTGTTCTACTGTTACTTTTGGTGGAGTGGGGGAAGAGGGGCTTATGATATCTACAAGGATCGGAGGGATCATGATAGGTGCACTCATAACTGTGATTGGTATGTCACCAAAGAAGGTGTAGAAGGTTACACAGAAGAGAATAAGAATTATGGCAAAAAACGTAGACGAGACATATTGTTCAAGTGGGACGAAACAGACAAACTTACTAAGGGTGGAGAAGTATAG 471 0.4204 MATYDPATSTNSTTETLSEEEPKRSPDGLFLFTVHMLIVNKLGHGTPLTLHCKSKNDDLQVHVIQYDQSFRWKFRPNFWGTTLFYCYFWWSGGRGAYDIYKDRRDHDRCTHNCDWYVTKEGVEGYTEENKNYGKKRRRDILFKWDETDKLTKGGEV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00497 156 PANTHER - 34 122 IPR010264 -
Viun11g00497 156 Pfam Plant self-incompatibility protein S1 36 134 IPR010264 -
Viun11g00497 156 MobiDBLite consensus disorder prediction 1 16 - -
Viun11g00497 156 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00497 Viun-Chr11 4789205 4789675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00497 36 121 Carbohydrate Esterase AT3G16970 39.326 2.39e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00497 - - var:108339240 205.682