Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00496 ATGGCTACCTGTGATCCTGCTACATCCACAAACTCTACCACAGAGACATTATCAGAAGAACCGAAACAGCCTCTGTTTGGATTTTACTGGTACACCGTACATATGGTTATAGTGAACAATCTTGGTGGTGACAACTTACCTCTCACTGTTCATTGCAAATCCAAAAACGATGATCTGCAGGCTCATGTGATAGACTATAAGAGAAGTTTTAGGTGGCACTTTCGTCCTAATTTTTGGGGAACAACGTTGTTCTTCTGTCACTTTTCATGGAGTGGGGGAGAAGGGACCTATGATATCTATAAGACTAAGAGGGATTCTCGTAGGTGCACACGTCACTGTGATTGGTATGTCACCCAACAAGGTGTAGAAGGCTACACAGAAGATGATATGTTTTTGGGGCCACGTAGGAAAGACATAGTCTTCAAGTGGAAAAATCAATGA 441 0.424 MATCDPATSTNSTTETLSEEPKQPLFGFYWYTVHMVIVNNLGGDNLPLTVHCKSKNDDLQAHVIDYKRSFRWHFRPNFWGTTLFFCHFSWSGGEGTYDIYKTKRDSRRCTRHCDWYVTQQGVEGYTEDDMFLGPRRKDIVFKWKNQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00496 146 Pfam Plant self-incompatibility protein S1 34 124 IPR010264 -
Viun11g00496 146 PANTHER - 32 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00496 Viun-Chr11 4776110 4776550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00496 21 146 Carbohydrate Esterase AT3G16970 36.923 1.86e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00496 - - vun:114170110 321.627