LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun11g00496	ATGGCTACCTGTGATCCTGCTACATCCACAAACTCTACCACAGAGACATTATCAGAAGAACCGAAACAGCCTCTGTTTGGATTTTACTGGTACACCGTACATATGGTTATAGTGAACAATCTTGGTGGTGACAACTTACCTCTCACTGTTCATTGCAAATCCAAAAACGATGATCTGCAGGCTCATGTGATAGACTATAAGAGAAGTTTTAGGTGGCACTTTCGTCCTAATTTTTGGGGAACAACGTTGTTCTTCTGTCACTTTTCATGGAGTGGGGGAGAAGGGACCTATGATATCTATAAGACTAAGAGGGATTCTCGTAGGTGCACACGTCACTGTGATTGGTATGTCACCCAACAAGGTGTAGAAGGCTACACAGAAGATGATATGTTTTTGGGGCCACGTAGGAAAGACATAGTCTTCAAGTGGAAAAATCAATGA	441	0.424	MATCDPATSTNSTTETLSEEPKQPLFGFYWYTVHMVIVNNLGGDNLPLTVHCKSKNDDLQAHVIDYKRSFRWHFRPNFWGTTLFFCHFSWSGGEGTYDIYKTKRDSRRCTRHCDWYVTQQGVEGYTEDDMFLGPRRKDIVFKWKNQ	146

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun11g00496	146	Pfam	Plant self-incompatibility protein S1	34	124	IPR010264	-
	Viun11g00496	146	PANTHER	-	32	122	IPR010264	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun11g00496	Viun-Chr11	4776110	4776550	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun11g00496	21	146	Carbohydrate Esterase	AT3G16970	36.923	1.86e-18	74.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun11g00496	-		-	vun:114170110	321.627

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