Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00469 ATGGCGATTGAACGAATTGTGGAGCAAAGTCCGTGTGGTTTTGTTGCTGGAACAGATGAAGAAGATATGAGGAGTTCGCACTTGAAGAGGCATGAAAAGAGCGATGCCCACGTCGACGAAGATAGAAGCAAAAAGAGCCCATGTTTGGACAAACATGTTCTGCTGTTTCCACCTGCCTCTGAATCAACTAGCGCTATAGGGGCATGGGAGCATTTTAAAGTGGGTCTATTTCATGAAATTGATCACAGCAGGCTCTCACCAATATCCCCAGTGCAACTAAAATCTGTTCGCATTGGAATGGTCAGTGACATAGGGGAGCACTTGGTGTCGTTAAGGTACCCAAGCCTCCAATCACTTCGCATGCACTTCAGCGACCAAAACTTTGGGAAACAGGACGGGAAGACGATCCCTGCACTCGACGAGAAGTACGTGATGGGGATGGACTTCGCCATCAAAGCGCTTTCCAGGAGCATCCCAACGGAGGAATTTGCACAAAGAAGAAACTCTTGGAGCTTCTGGGTCTCTCCTTCTAAAGAAAACATCCAAGACCCCGAGAATCCAGCTCTCAATGATGTCGCAAGGAGCCTCATTTCCAAGCAGGGTTCTTGCTGGACTCAGCTCAAGTTCACAGGGATGATGCAGTGGGGAAAACGCCGGCAAGTTCGGTTCTTGGGCCGCCATGAAGAGGCAAAGGTTCAATCTTTACCGGAACCGTGTAAGGGAAAAGTGGCCAGCGTTGAACTCAGAGAAGGAACTAGTGAGAAGAAAAGGAAGAAAGGCGAAGAGGAAGTGGAGGCTACCAAGGAAGAGTCTTTCGGGGATATGAGGATGACGCGTCAATGTAGGCAAAATCATCAAAACGTTAGTAGCAATGGAGATAAAAAATCTAAGAAAGCAAAGAATGACCCCAAGAAGCAACAAATCGTGCTTTACAACAAAAACAAACGGAAAATCTCTATTGGAAGATGGTCTGCTGAGAGGTATATGATGGCAGAGGAGAACATGTTAAAGGTTATGAAAGAAAAAAGAGCTGTGTATGGGAACCCAATATTGAGGCCAGATTTGAGATCAGAAGCACGAAAGTATATTGGTGATACGGGTCTGCTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCCGGAGGAGTTGAGAGATTCCGACGGCGACACAATGCTGAGGGCGCAATGGAATACTGGTTAGAGAGTGCTGATCTTGTTGAAATGAGGAAGGAAGCAGGGGTACAAGACCCTTACTGGACTCCGTCCCCTGGATGGAAGCTTGGGGACAGCATTTCACAAGATTACGTTACTGGCAGTGAGCTAAGAGAGATCAAAGAAGAAATACTCAAGTTGAAACAAGATATGCGAGAGCTCGCAATGAAGAAGGGAGAGGAGACATTGGCCATTGAGACTACTCCTAGCTCATGTTTGTCTAGTCTGAATTCGGAGGACTATGGTTCCTTCGCTCCAAAGGAGGAGATTTATGCGGAGTTGGTGAGTAAGAAGGCTAAAATAGAGGAACAATTGAAGGAAATTTCACTGACTCTGAGTTGTATGGAGGAGAAACTTAAAATGCTAAAACCAACAATGGTGGAGGAACAAATAATGTCAGAATCGGAAACACCCCAAGCCTGTTTTCCAGGACCAACATCAGTAAACATAGGAGGTGAGACAAGGAAGGAAAAGAAAAGCTACAAGAACAGAGTAACAAACTCAGCGGATACACAGATGCAGAAAAACAACAGTGAAGCAGAGAACAAGACAGCAAAAATTGAAAGGCTGAAAAGTGGTTTTCAAATATGCAAGCCTCAAGGAACCTTTGTGTGGCCAAATATAGGTGTGTCTCCCCATGTTGTGGGCAACCATGATGACCAAACAGTGGTCCCTACGCCACCATCAGCTTCCTCTTCTACCACCTCAGCCCCAAAGCTGATTTTCAAACCTCAGCCTCAGCACCTACCATTACAAATCCTAACCCGTCCTTCTTCCCCAGTTAAGCCACTTGCAGAGAGGCGCCCTGTGAGCACAGCCACACTGACCCATGTCACTGGGCCATTCTCCCCTCATCTTTCTCCTCCATCAGGTACTCCTTTATCCAAAATCACCACCACCATCACTATTAACCTCAATGAGGCCCCTCTCACCCTAGACTAG 2160 0.4657 MAIERIVEQSPCGFVAGTDEEDMRSSHLKRHEKSDAHVDEDRSKKSPCLDKHVLLFPPASESTSAIGAWEHFKVGLFHEIDHSRLSPISPVQLKSVRIGMVSDIGEHLVSLRYPSLQSLRMHFSDQNFGKQDGKTIPALDEKYVMGMDFAIKALSRSIPTEEFAQRRNSWSFWVSPSKENIQDPENPALNDVARSLISKQGSCWTQLKFTGMMQWGKRRQVRFLGRHEEAKVQSLPEPCKGKVASVELREGTSEKKRKKGEEEVEATKEESFGDMRMTRQCRQNHQNVSSNGDKKSKKAKNDPKKQQIVLYNKNKRKISIGRWSAERYMMAEENMLKVMKEKRAVYGNPILRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGAMEYWLESADLVEMRKEAGVQDPYWTPSPGWKLGDSISQDYVTGSELREIKEEILKLKQDMRELAMKKGEETLAIETTPSSCLSSLNSEDYGSFAPKEEIYAELVSKKAKIEEQLKEISLTLSCMEEKLKMLKPTMVEEQIMSESETPQACFPGPTSVNIGGETRKEKKSYKNRVTNSADTQMQKNNSEAENKTAKIERLKSGFQICKPQGTFVWPNIGVSPHVVGNHDDQTVVPTPPSASSSTTSAPKLIFKPQPQHLPLQILTRPSSPVKPLAERRPVSTATLTHVTGPFSPHLSPPSGTPLSKITTTITINLNEAPLTLD 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00469 719 Coils Coil 443 463 - -
Viun11g00469 719 Coils Coil 493 524 - -
Viun11g00469 719 MobiDBLite consensus disorder prediction 247 276 - -
Viun11g00469 719 MobiDBLite consensus disorder prediction 20 44 - -
Viun11g00469 719 MobiDBLite consensus disorder prediction 247 306 - -
Viun11g00469 719 MobiDBLite consensus disorder prediction 14 44 - -
Viun11g00469 719 PANTHER PROTEIN DYAD 70 685 IPR044221 GO:0007131|GO:0051177|GO:0051321
Viun11g00469 719 MobiDBLite consensus disorder prediction 540 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00469 Viun-Chr11 4502141 4506646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00469 322 403 PHD Transcription Factor Family AT5G22260 41.667 6.31e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00469 - - var:108339226 1312.36