Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00467 ATGTTGATACTGGTTCTTGGACTGGTTTCAGCTACTTTGTTAGTGATTGTTGCAGGTTATGTGTTGTATTGCAAGAAGAGAGTTTCAAGGTGTGAGAGTAAGGACATTGAAAGCTCGGAACACAAGGAGGAGGAGGAGGTGGCTCAGAAGGAGGATTTGATGATCTTTCAAGGTGGGGAAGACCTTACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAACTATGGAACATTGTACAAGGCCTTGTTGCAGAGGAGCAACAAGGTGAGGCTGCTCAGGTTTCTGAGGCCAGTGTGCACTGCAAGAGGTGAAGAATTGGATGAGATGATTCAGTTTCTTGGAAGGATAAGACACCCTAACTTGGTTCCTCTTCTGGGGTTTTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTATAGACATGGGAATCTTACTCAATTCATAAGAGATGGAAATGGAGAGTGCTACAAATGGTCAAACATATGCAGAATATCCCTTGGTATAGTGAAAGGATTGGAGCATCTTCACACATCACAGGAGAAGCCTATCATCCATGGAAACCTCAAGTCTAAGAACATTCTTTTGGACCGTTCCTACCAGCCCTACATCTCAGATTCTGGTCTGCATCTTCTGCTGAATCCTACTGCAGGCCAAGAAATGCTTGAAAGTTCAGCAGCACAGGGTTACAAGGCACCAGAACTCATCAAAATGAAAGATGCTACTGAAGAGAGTGATATCTATAGCCTTGGTGTGATCTTGCTGGAACTGCTTTCAGGAAAGGAACCTATCAATGAACACCCTACTCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCAGTTCTTGGACACAGAATTGCTGATCTATACCACCCTGCCATTCTTCTCAGAAACAGCAGAGAGGACAGTGTTCCAGTCACAGAAGAATTCATTCTCAAAGTTTTTCAACTTGCCATGGCTTGTTGCTCCCCTTCACCCTCAGTTAGACCTAACATAAAGCAAGTCCTGAAGAAACTTGAAGAAATTATGTTCTAG 1065 0.4347 MLILVLGLVSATLLVIVAGYVLYCKKRVSRCESKDIESSEHKEEEEVAQKEDLMIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTARGEELDEMIQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNICRISLGIVKGLEHLHTSQEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDATEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILLRNSREDSVPVTEEFILKVFQLAMACCSPSPSVRPNIKQVLKKLEEIMF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00467 354 SUPERFAMILY Protein kinase-like (PK-like) 72 350 IPR011009 -
Viun11g00467 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 40 352 - -
Viun11g00467 354 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Viun11g00467 354 Pfam Protein tyrosine and serine/threonine kinase 73 349 IPR001245 GO:0004672|GO:0006468
Viun11g00467 354 Gene3D Phosphorylase Kinase; domain 1 31 146 - -
Viun11g00467 354 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00467 Viun-Chr11 4412421 4416163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00467 35 352 Carbohydrate Esterase AT5G61570 60.308 1.58e-135 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun11g00467 PK_Tyr_Ser-Thr 4.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00467 - - gmx:100788898 649.432