Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00398 ATGGCGGAGGTCATGAATGTGCCTCCAGAATCCCTCGACAAATCCCCTTCCTCCGACGCTCCCCCTCCTCCGCCGCCGCCTGCACCTCCGACTGAGCCCTCCCCTGTCGCGGACGACCTCCCTCCCCCGCCCCCGCCGCCGCATTACCAGCCCCGGCGAAGAGACCGCAGAGACGACAGGGATTTCGATCGCCCTCCCAACCGACGTGGCGATTACTATGACCGCAACGCGTCGCCGCCGCGAGACAGAGACCGGGACAGGGACAGGGATTTCAAGCGCCGACGTAGCCCGAGCCCTCCCCACCGCGACCAGCGGTATTCTCCGGCATCGCGGCGTTCGCCTCCGCCGTACAAGCGGTCGCGTCGGGGGAGTCCTCGCGGCGGCTATGGACCTGATGATAGACATGGGTATAATTATTATGGTGCTTATGAACGGGGATTGGGTGGAAGAGGTGGTTATGCAGATGAGAAGTCCTATGGTAGGTTTGGACCACGTTCTGGTGGGGGGTATCAGAATGGGATTTCTGATGTAGAATCCAATCGTGGTTATGGAGACATGCCAAGCCAAAGGGAGGGGCTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCTGCTGAAGCAGAGCGTAGGTATCAAGAATACAAGTCAGAGTATATTTCAACCCAAAAACGAGCTTATTTTAATGCTCATAAGGACGAGGAGTGGTTGAAGGATAAATATCATCCAACAAATTTGCTTACTGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGAATTTTTGCTTGATTTACAGAGTGGAGCATTAGAACTAAATCCTGGTTTGGAGGCCTCTGTATCCAACAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGACACTGGAGGCAAACGAAGAAGGCATGGAAGGGGACCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCAATCAGTTCTGAACCAAGAAGGATACAGGCAGATGTTCAACAGGCTCAGGTCCTTGTCCGTAAGCTTGATGCTGAAAAAGGGATTGAAGATAATATTTTGTGCAGCAGCAGCGATCACAATAAAAATGATGACAAGGCACACAGTGGATCTGTGGGCCCCATAGTAATTATTCGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTCGAGCTTCTGGATACACTTATAACTTACCTTTGGCGGATCCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAGGCCAAGGGCTTTAGGCATGTGAGACCAGAAGGGACGGGGCATGAAGAAACAGGTAAATCAGGGTCTGATTGGGAGAAGAAGCTTGATTTATTTTGGCAAGGAAGGCTGAATGGTTTGGATCCCTTGGAAATAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGATGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCGGAATTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTGTTCTGGAGCAGACTACCAAAGTACGAGAGGATCTCTACTTTCAAAATTACATGAATGATCCAGATGCTCCTGGCGGGACACCCATAATGCAGCAATCTCAGAAGGACAGGCCCTTAAAGCGAAGATTAGCTATTGAGGGTCGATTGAGAGATGATCGTGGTAATAGACGAGACCATGATCGGAATGACAGAATGAATGGAGATAGGCCTGATAATTCCCCATCCAGTGAAAGACAGTCACTTGAGATGGGAAACCGTGATGAAGCAATGTATGCAGGGCCAGCCGTACCTCCATTTGCCTCAGATATACCTCCTCCACCAGTGTTGATGCCTGTTCCTGGTGCTGGGCCTTTGGGACCGTTCGTTCCTGCTCCCCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGACCAACATCATATGATGCCTCTGGAAGAAAGATGCGGGGTGGCCCTCATTTGGGTGGTGCAGCACCAATTATTGCTGTTCCTCCAAACTTTCGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCCGAGGACGAGGTCACTGTTATCGACTATCGGAGTTTGTAG 2175 0.4956 MAEVMNVPPESLDKSPSSDAPPPPPPPAPPTEPSPVADDLPPPPPPPHYQPRRRDRRDDRDFDRPPNRRGDYYDRNASPPRDRDRDRDRDFKRRRSPSPPHRDQRYSPASRRSPPPYKRSRRGSPRGGYGPDDRHGYNYYGAYERGLGGRGGYADEKSYGRFGPRSGGGYQNGISDVESNRGYGDMPSQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKEFLLDLQSGALELNPGLEASVSNKSGQASEPNSEEEADTGGKRRRHGRGPNKENDFSAAPKAHPISSEPRRIQADVQQAQVLVRKLDAEKGIEDNILCSSSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPEGTGHEETGKSGSDWEKKLDLFWQGRLNGLDPLEIMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVLEQTTKVREDLYFQNYMNDPDAPGGTPIMQQSQKDRPLKRRLAIEGRLRDDRGNRRDHDRNDRMNGDRPDNSPSSERQSLEMGNRDEAMYAGPAVPPFASDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPTSYDASGRKMRGGPHLGGAAPIIAVPPNFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00398 724 MobiDBLite consensus disorder prediction 286 300 - -
Viun11g00398 724 MobiDBLite consensus disorder prediction 563 599 - -
Viun11g00398 724 Pfam SERRATE/Ars2, N-terminal domain 197 278 IPR021933 -
Viun11g00398 724 MobiDBLite consensus disorder prediction 665 698 - -
Viun11g00398 724 MobiDBLite consensus disorder prediction 301 318 - -
Viun11g00398 724 Pfam Arsenite-resistance protein 2 442 591 IPR007042 -
Viun11g00398 724 MobiDBLite consensus disorder prediction 544 610 - -
Viun11g00398 724 MobiDBLite consensus disorder prediction 286 338 - -
Viun11g00398 724 PANTHER ARSENITE-RESISTANCE PROTEIN 2 52 722 IPR039727 GO:0006397
Viun11g00398 724 MobiDBLite consensus disorder prediction 15 48 - -
Viun11g00398 724 ProSitePatterns Zinc finger C2H2 type domain signature. 502 525 IPR013087 -
Viun11g00398 724 MobiDBLite consensus disorder prediction 1 185 - -
Viun11g00398 724 MobiDBLite consensus disorder prediction 49 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00398 Viun-Chr11 3515127 3522335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00398 79 724 C2H2 Transcription Factor Family AT2G27100 63.811 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00398 K27103 - gmx:100788714 1092.8