Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00396 ATGGGGACCCAAACGATGGGATCTCAAGGTGGTGGTAAAGACAGTAATGGAAAACAGTCACAAGTCCAGCCCCTGGTGCGGCAAAACTCAATGTACAGTCTCACACTGGATGAGGTTCAGAATCAACTGGGTGATCTAGGGAAGCCGCTAACTAGTATGAACCTTGATGAGCTTCTGAAAAATGTGTGGACTGTTGAGGCTGGCCAGGCAGCTAGTATGGACAATGACGGCGCGGCACAGGCCGGTCAAGCTGCTCTGCAGCGTCAGGCGAGTATGTCACTGACCGGAGCACTGAGCAAGAAGACAGTGGACGAGGTTTGGAGAGACATCCAACAAAACAAAGTCATGGAGGAGAAGAGGTTCCGTGACAGACAGCCTACTTTGGGAGAAATGACTTTGGAGGACTTCTTGGTGAAAGCAGGAGTAGTTACAGAAACAACTTCTAACCAAAAGAACGCCGACGCCGGTAGTGTATCCACGCCAGCGCCGGCGCCAGCACCAGTACCAGCACCAACGCCAGCACCAGCACAAGTACCGGTACCAGCACCGGCACCAGTACCAGTACCAGTTCCGATGGATTCAAACGTGGCAGTACCACCACAGTTTCCTCCACAAGGACAGTGGATACAGTATCCACCAGTGCAATATCAGCATCCACAGCAAAGTTTGATGCAGATTTATATGCCTGGCCAGGGTATGGCACAACCAATGCACATGGGTCCTGGAGGTTCAATGGATGTTTCGTTTGCAGATGGCCAGGTTGCAATGCAGTCTCCTATGATGGGAGCAATGTCGGATTCACACACTCCTGGAAGGAAAAGGACCACTCCTGAGGACATGATGGAGAAAACTGTTGAGAGGAGACAGAAAAGAATGATAAAAAATCGTGAATCTGCTGCTCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAACTGGAGAACAAAGTCTCGCGTCTAGAAGAGGAAAATGAAATGCTGAGGAAACGACAGGAGTTAGAGAAGATGTTGCCAAGTACACCACCTCCTGAGCCTAAGTATCAACTTCGCCGAATAGGATCAGCTCCATTCTGA 1074 0.4991 MGTQTMGSQGGGKDSNGKQSQVQPLVRQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTVEAGQAASMDNDGAAQAGQAALQRQASMSLTGALSKKTVDEVWRDIQQNKVMEEKRFRDRQPTLGEMTLEDFLVKAGVVTETTSNQKNADAGSVSTPAPAPAPVPAPTPAPAQVPVPAPAPVPVPVPMDSNVAVPPQFPPQGQWIQYPPVQYQHPQQSLMQIYMPGQGMAQPMHMGPGGSMDVSFADGQVAMQSPMMGAMSDSHTPGRKRTTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEMLRKRQELEKMLPSTPPPEPKYQLRRIGSAPF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00396 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 285 330 IPR004827 GO:0003700|GO:0006355
Viun11g00396 357 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 356 IPR043452 GO:0003700|GO:0045893
Viun11g00396 357 MobiDBLite consensus disorder prediction 162 176 - -
Viun11g00396 357 Gene3D - 285 339 - -
Viun11g00396 357 MobiDBLite consensus disorder prediction 147 176 - -
Viun11g00396 357 MobiDBLite consensus disorder prediction 271 335 - -
Viun11g00396 357 Pfam bZIP transcription factor 287 335 IPR004827 GO:0003700|GO:0006355
Viun11g00396 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 290 305 IPR004827 GO:0003700|GO:0006355
Viun11g00396 357 MobiDBLite consensus disorder prediction 1 26 - -
Viun11g00396 357 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 285 337 - -
Viun11g00396 357 SUPERFAMILY Leucine zipper domain 287 332 IPR046347 GO:0003700|GO:0006355
Viun11g00396 357 SMART brlzneu 283 351 IPR004827 GO:0003700|GO:0006355
Viun11g00396 357 Coils Coil 303 330 - -
Viun11g00396 357 CDD bZIP_plant_BZIP46 287 336 - -
Viun11g00396 357 MobiDBLite consensus disorder prediction 261 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00396 Viun-Chr11 3480501 3485359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00396 18 357 bZIP Transcription Factor Family AT3G56850 52.616 1.77e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g00396 bZIP_1 3.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00396 K14432 - gmx:100101875 483.411