Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00357 ATGGAAGAAGGGTTGTGCGAAAACTCAGTTCCTGGTTCTGGTTTTGGTTTGGTTGATAAAACTAGGATTGTAGAGGTTAAACCCCTGCGTAGTTTGGCACCTGTGTTGCCAAAATCGCTTCAACTTTCTATCTGTGGAAGGTACCCATCTGGGTTTCCTCCGTTTGTTTTGTTCGAGGAACCCGAAGAATCTCAGCCATCACCTACTCCTATTCCAGCTCCAATAAGGTCATATAGGAAGCCACCAGATGAAGAAGAAACCCCTCATGAAGTCAATGGGGACACTTCTTCACCTGTGGAGGGTGTGAATGGTGAGAGTGTCGACGATAGCCCAAACCGTTCTGCGCAGCCTATGAAGAGCTGCAAAACATCCCAAAAACGGCGCAAAAAAACTCAGGATTTTGGTGGCAGTTCTTCGCTTGGTGGTATTAGCATGGCCCAAAGGGATGATGGTGATCGGGAAGTGGTTAATCTTGTGCTCATGAATTTTGATTCTCTCCGGAGAAGGTTCTGCCAACTTGAAGATTCCAAGGATTTGAACACATTGATGGGAACCAAGCGCCCGGATTTAAGAGCAAGCAATGTGATGACAAGCAAAGTGTTTCGCACAAACATGAGGAGGAGAATAGGAGCAGTGCCTGGGGTTGAGATTGGGGATATTTTCTTTTTGCGGATGGAAATGTGTCATGTGGGTTTGCATGGGCAGTCAATGAGTGGAATTGACTACATGAATGCCAAGGATGAGCTTCAGGAGGAACCGGTGGCTTTAAGCATTGTCTCTTCAGGAGTGTATGATAATAATGCAGAGGAAGACGATGTTTTAGTTTATACCGGCCAAGGTGAGAACTTCAACAAGAAAGACAAGCATGCGGTTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTAGATAGAAGTGTACACCGACAGAATGAAGTAAGAGTCATCCGGGGCTTGAAAGATGCAGTGAATAAAAATGCAAAATTCTATGTCTATGATGGTCTGTATAAAATCCAGGGTTCTTGGGTAGAAAAAGGGAAGTCTGGTGGTAGTGTATTCAAGTACAAGTTTGTTAGATTACCTGGGCAACCTAGTGCTTTTGCTGTTTGGAAATCAATTCAGAAGTGGAAGACAGGTTCATGTTCATCTTCAAGGGCTGGTCTTATTCTTGCAGACCTCACCACAGGAGTTGAGAGTATTCCTGTATCACTTGTAAATGATGTTGACAACGAGAAGGGGCCTTCTTTTTTCACCTATTCCAATTCTCTTAGAAATTCAAAACCATTCGGTATAGTGCAATCTTCATATGGCTGCAACTGTAACAAAACATGTGTCCCTGGGGATTTGAGCTGCTCTTGCATTCAAAGAAATGAAGGTGACTTTCCATATATTGCAAATGGTGTTCTAGTCAGTCGGAGACCATTGGTTCATGAGTGTGGCCCAATGTGTAAGTGCTTTCCTAACTGCAAGAATCGAGTATCGCAGACAGGTTTGAAGCACCAAATGGAAGTTTTCAAAACCAAAGATAGAGGGTGGGGACTTCGATCAATTGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTAATTGATAGAGCCAAGGTATATAAGAATGGAGGATATAATGATGAGTATGTTTTTGATACTAGTCGTATTTACAATCCATTCAAATGGAATTATGAGCCTAGCTTATTGGAAGAAATAAGCTCATCTACTGAGGATTATACTATACCATCTCCTCTAATTATCAGTTCTAAAATTTTTGGAAATGTGGCTAGATACATGAATCATAGTTGCTCCCCAAATGTCTTCTGGCAGCCAGTATTGTACGCAGAAAATAATCAATACTTTCTTCACATTGCATTTTTTGCCCTTAGACACATTCCTCCAATGGTAGAGTTAACATATGATTATGGATGTTCTGGTCATGCTGATGGCAGTAGTGCACCCCAAGGGAGAAAGAAATGCTTGTGTGGATCAGCAAAATGCTGTGGTTCTTTTGGTTGA 2016 0.4221 MEEGLCENSVPGSGFGLVDKTRIVEVKPLRSLAPVLPKSLQLSICGRYPSGFPPFVLFEEPEESQPSPTPIPAPIRSYRKPPDEEETPHEVNGDTSSPVEGVNGESVDDSPNRSAQPMKSCKTSQKRRKKTQDFGGSSSLGGISMAQRDDGDREVVNLVLMNFDSLRRRFCQLEDSKDLNTLMGTKRPDLRASNVMTSKVFRTNMRRRIGAVPGVEIGDIFFLRMEMCHVGLHGQSMSGIDYMNAKDELQEEPVALSIVSSGVYDNNAEEDDVLVYTGQGENFNKKDKHAVDQKLQRGNLALDRSVHRQNEVRVIRGLKDAVNKNAKFYVYDGLYKIQGSWVEKGKSGGSVFKYKFVRLPGQPSAFAVWKSIQKWKTGSCSSSRAGLILADLTTGVESIPVSLVNDVDNEKGPSFFTYSNSLRNSKPFGIVQSSYGCNCNKTCVPGDLSCSCIQRNEGDFPYIANGVLVSRRPLVHECGPMCKCFPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSIDPIRAGTFICEYAGEVIDRAKVYKNGGYNDEYVFDTSRIYNPFKWNYEPSLLEEISSSTEDYTIPSPLIISSKIFGNVARYMNHSCSPNVFWQPVLYAENNQYFLHIAFFALRHIPPMVELTYDYGCSGHADGSSAPQGRKKCLCGSAKCCGSFG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00357 671 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 83 664 - -
Viun11g00357 671 Pfam SAD/SRA domain 209 362 IPR003105 -
Viun11g00357 671 MobiDBLite consensus disorder prediction 58 148 - -
Viun11g00357 671 ProSiteProfiles SET domain profile. 499 642 IPR001214 GO:0005515
Viun11g00357 671 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 24 671 IPR025794 GO:0016571
Viun11g00357 671 SMART preset_2 389 483 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun11g00357 671 ProSiteProfiles YDG domain profile. 210 358 IPR003105 -
Viun11g00357 671 ProSiteProfiles Post-SET domain profile. 655 671 IPR003616 -
Viun11g00357 671 SMART G9a_1 205 362 IPR003105 -
Viun11g00357 671 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 192 377 - -
Viun11g00357 671 MobiDBLite consensus disorder prediction 92 121 - -
Viun11g00357 671 Pfam SET domain 510 642 IPR001214 GO:0005515
Viun11g00357 671 SUPERFAMILY PUA domain-like 192 379 IPR015947 -
Viun11g00357 671 Gene3D SET domain 381 670 IPR046341 -
Viun11g00357 671 Gene3D - 192 379 IPR036987 -
Viun11g00357 671 SMART set_7 499 648 IPR001214 GO:0005515
Viun11g00357 671 Pfam Pre-SET motif 393 491 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun11g00357 671 SUPERFAMILY SET domain 398 668 IPR046341 -
Viun11g00357 671 ProSiteProfiles Pre-SET domain profile. 435 496 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00357 Viun-Chr11 3117991 3123049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00357 19 671 Su(var)3-9 homologs AT1G73100 50.072 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun11g00357 SAD_SRA 1.4e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00357 K24405 - gmx:100800651 1145.57