Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00351 ATGGAGATGGAGCAAACCAATACAGATGGAGCAAACAACAGAAGAATTCTTTGGAACTTCAACACCATCTACATCTGCTCTCAGCCATTTGGATTTATCGATCGACATTTTGCTGTTGCTTATGAACAAGAATTAGTTCAACAGTGGCACTTGGTAGATGTAAATGGTAAGAGCACGACAGTTACCTATAACATGGATTCAAATAACCCAAAAATCATAGGAGGTTGGAGTAATATGAGAGATTTGTATGACATCAAAAGTGACTCTCACATGCGGTTTCAGTATATGGGAAATTCTTTATTTCACATAATTATGTTTAAAGGTGGTTGTACACCAAGGAGTTTGTCAACATTTATGTGCCGTATCAGTCATCAAGAAACAAGATCTATATTTTCAGTGAAATTGACAAAGTATCAAAGCAAAGCAAGTCACTTGGACTTGCCATCAAAGTTTGCCAACTTCATTCGGGACGAGAATGTACAAGATGTGTTTCTTATAGGGCCCAAAACTATAGTCAATTGCAAAATTCTATTATCAAATAGGAATAGAAGTTCAACAAAGATAGGTCAAGGTTGGAAGTTATTTTGTGTTGAAAATGAGTTAAAAGAAGGTGATATTGTTGTCTTCCAAACAGACAATGATTTTATCGAACCAAATATTGAGGTCTTTGTTAATGGTTGTTGTTGTGATTAG 693 0.3535 MEMEQTNTDGANNRRILWNFNTIYICSQPFGFIDRHFAVAYEQELVQQWHLVDVNGKSTTVTYNMDSNNPKIIGGWSNMRDLYDIKSDSHMRFQYMGNSLFHIIMFKGGCTPRSLSTFMCRISHQETRSIFSVKLTKYQSKASHLDLPSKFANFIRDENVQDVFLIGPKTIVNCKILLSNRNRSSTKIGQGWKLFCVENELKEGDIVVFQTDNDFIEPNIEVFVNGCCCD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00351 230 SMART B3_2 130 226 IPR003340 GO:0003677
Viun11g00351 230 SMART B3_2 20 109 IPR003340 GO:0003677
Viun11g00351 230 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 126 210 IPR039218 -
Viun11g00351 230 Gene3D - 119 225 IPR015300 -
Viun11g00351 230 ProSiteProfiles B3 DNA-binding domain profile. 130 226 IPR003340 GO:0003677
Viun11g00351 230 Pfam B3 DNA binding domain 131 214 IPR003340 GO:0003677
Viun11g00351 230 CDD B3_DNA 130 223 IPR003340 GO:0003677
Viun11g00351 230 SUPERFAMILY DNA-binding pseudobarrel domain 128 215 IPR015300 -
Viun11g00351 230 Gene3D - 21 110 IPR015300 -
Viun11g00351 230 SUPERFAMILY DNA-binding pseudobarrel domain 32 107 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00351 Viun-Chr11 3089632 3090765 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Viun11g00351 B3 1.3e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00351 - - vun:114169435 482.641