Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00332 ATGATGTCTGAAGAATCACTGAGTATTGTGGTGATCCACTATGCATCAAGAGACTTCAACACAAGTGCCATAAAAGTGGTGATGCAGGGATTTTCACTTGGTCGTGGAGACAAGCTTACACTTCTTGTAATTCTTCGCCAAGCTTATAGTCCAACTAGGCTTCCCTTCATTGCACATGCAAAATTGCGTGGATTATTTGAGACTGATCACAAAATTGTTGAGGAAGAAGTTGCTAAGAAGAAAGAAGAGCTTCTTAATAATGCAAGCATAAGGGAAATTTCTGAGCAGTGTGAAGCAGACAGGATCCAATTCCGGATAGAAGTTCTGCAGGGTAAATTACCAGAGGTTGCTGTAAATGCTGCTATCCGTTTGGAGGCAACATCAGTGATACTTGATAGACAGATGAAGAAATATAAGAAGGAATTCAAGCAGAGTCTCTTTTGTTCTTTGCTAATAATGAAACGTGACAACTCTGTGCAACACCTGAGAGGGCCAAGGGAAACACATCTGTGTGATAGAAGCAATGGAAATGCAAGATGTGTTACATCAGGTCCTAATTCTAAATCTCCCTCAAGAATACGGCAACTAACAAATTCCTGCTCCAATACCAGTTCTTCATTTCCTACACTTGCAAAGGGTGGTTGCCCCCAACCCCAACTTTTTTATTCTCAAATAAAACAAATCCCTGAAAATAGAGAACAAGACATGGCAAGAGGGTATTGCCTACTACCCATTACTGATACTCAAAAGACTAATCATACTGAAGAGTATCACCCAGCAACACCAGCAGAACATAGCGACAACCATGAAGCATATCAATTAGTTGAGCAGTTCAAAAACTCTGTTTGCTCAGTATGCAAGAACAGAAGACCAAAATTTGAAGTGATGAAAGAATTCACATACGCGGAGCTGCATGAAGCTACACGAGGTTTTTCACCAAAAAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTTCAAAGGAATGCTGCATGGAGGACTAAGGATAGCTGTTAAGCAACATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAGTTCAAATCTGAGGTCAATGCACTCAGCAGAGCTATACATGAGAATGTGGTCATGCTGCGTGGATCTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTCATTTGCAATGGCTCTCTTGACCAACATTTATCACAACACTCACGTAGGCCTCTTACTTGGGAAGAAAGGATCAAAGTAGCAATTGGAGCTGCAAAAGGCTTATTGTACTTGCATCAGAACAATATAATACACCGAGATATGAGGCCTAGCAACATCCTTGTTACACATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATATTGTTGGAACTATAGGGTATTTGGCACCAGAATATGCAGAATCAGGAAAAATGTCAACCAAGACAGATGTATATGCTTTCGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGCAGACAAACGTCTTGGCGAAAAAAGTCTTGTGGGATGGGCAAGGCCACTACTTAAAGAAAGGAACTATCCAGATCTAATTGATGAACGGATGTTGGATAATCATGATTGCCATCAGCTTTTCTGGATGATTCGTCTAGCAGAAAAATGCCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGACACAGTGGTGAATGCCTTAACTCATATACGGGAAGGAAACACATGCAGTGTTGTACTAAGAGACTGCTCTCCAGCACAGTCAGATTCATCCTATGATATGTCAGATTTGCTTATCTCAGATACCTCTCAGGAGATGGAAGGTGAAGATGCTAGCAACTATGCATATGCTTCTATGGGCTTCAGACCACCACCATCTCCTCCACTAGGAAGCACTTCAAGTACATCAAGCATGTTCACAGGGCTGAGTGAATCTCCTATAGATGATTTGTCCAATAATGAGAAAAAGGGTAAAAGGGCAAATGAACAAGGTGGGATACTTTAA 2025 0.4128 MMSEESLSIVVIHYASRDFNTSAIKVVMQGFSLGRGDKLTLLVILRQAYSPTRLPFIAHAKLRGLFETDHKIVEEEVAKKKEELLNNASIREISEQCEADRIQFRIEVLQGKLPEVAVNAAIRLEATSVILDRQMKKYKKEFKQSLFCSLLIMKRDNSVQHLRGPRETHLCDRSNGNARCVTSGPNSKSPSRIRQLTNSCSNTSSSFPTLAKGGCPQPQLFYSQIKQIPENREQDMARGYCLLPITDTQKTNHTEEYHPATPAEHSDNHEAYQLVEQFKNSVCSVCKNRRPKFEVMKEFTYAELHEATRGFSPKNYLSEGGFGSVFKGMLHGGLRIAVKQHKCASLQGEKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFICNGSLDQHLSQHSRRPLTWEERIKVAIGAAKGLLYLHQNNIIHRDMRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDIVGTIGYLAPEYAESGKMSTKTDVYAFGVVLLQLITGMRTADKRLGEKSLVGWARPLLKERNYPDLIDERMLDNHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVNALTHIREGNTCSVVLRDCSPAQSDSSYDMSDLLISDTSQEMEGEDASNYAYASMGFRPPPSPPLGSTSSTSSMFTGLSESPIDDLSNNEKKGKRANEQGGIL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00332 674 MobiDBLite consensus disorder prediction 623 674 - -
Viun11g00332 674 PANTHER OS01G0253100 PROTEIN 206 579 - -
Viun11g00332 674 FunFam Proline-rich receptor-like protein kinase PERK8 273 386 - -
Viun11g00332 674 Gene3D Phosphorylase Kinase; domain 1 272 386 - -
Viun11g00332 674 Gene3D Transferase(Phosphotransferase) domain 1 387 591 - -
Viun11g00332 674 Pfam Protein tyrosine and serine/threonine kinase 315 574 IPR001245 GO:0004672|GO:0006468
Viun11g00332 674 MobiDBLite consensus disorder prediction 638 655 - -
Viun11g00332 674 SUPERFAMILY Protein kinase-like (PK-like) 296 592 IPR011009 -
Viun11g00332 674 ProSiteProfiles Protein kinase domain profile. 311 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00332 674 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 387 589 - -
Viun11g00332 674 ProSitePatterns Tyrosine protein kinases specific active-site signature. 428 440 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00332 Viun-Chr11 2808920 2813518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00332 299 595 Trihelix Transcription Factor Family AT5G38560 44.984 1.07e-80 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Viun11g00332 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00332 - - vum:124838318 1207.59