Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00325 | ATGGGCATGGGAAAACCAAAAACAGAACTCAATGTGAGATCACTATATTTCTTTGTTTTCATGTTCTTGCTAAGCTTCAAATCTCTAGTTACCAAAGCACAACCACCCTTTTATTTGGGAGATGACTGTGATTTCACTCCTCAAAAGCCTCTCAGCAATGCATACAAAACCAACATTAACAACATGCTCTCATGGCTATCTTCAGATGCAGCCACAAGCAAAGGCTATAACTACAAAACCATAGGCAACAGCACCCCTCTGTATGGCCTCTATGATTGTCGTGGTGATGTTGTCGGCTACTTCTGCCAATTCTGTGTCTCCGCTGCTTCCAGAAGAGTCCTTCAGCACTGCCCTAACAGGGTCTCTGCTGTCATGTACTACAACTTCTGCATTCTGAGGTACTCCAATCAGAACTTCATTGGGAATGTCACGATAAACCATCCGAGACATCATGTTGGGAACAAAAGTGTGTCTGATGCAGAAGAGATTCAAAAGGGTGAGGATTTCATGAGAAGTTTGATCAGAAAAGCAACTGTGGAGACCAACATGTTGTACTACATGGATGGCTTCAATTTGAGCTCCACTCAGAGAAGGTATGGTCTGGTGCAGTGCACCAGAGACCTCACCAGTGAGAGATGCAGACAGTGCTTGGAGGCCATGCTGGCACAGGTTCCAAAATGTTGTGAACAGAAGCTGGGGTGGCTCGTGGGAACTGCTAGTTGTCACATAAAGTACGATGATTATATGTTCTACCTTTTCGACAACCAATCATATATTGTGCCTGGTTTAACAGCTAAACAAGGGGATGGTAGTAAGTCAAGAAACTTGATCATTGGATTGAGTGTGGTGGGGTTAGTAGCTCTGTGTTTGAGTATATATTGCTTATGCTACTGGAATAGAGTAAGAAAAGATGGGCTGATAACTGATACTATTCCTCTGTCTGCGTATACAAATTTGCCTATAATCCCATTAATCACAATTCTTGAGAGTACTGATAACTTCTCAGAAACGTCTAAATTAGGTGAAGGTGGATTTGGCCCAGTTTACAAGGGAATTCTACCAGATGGAAGACAAGTTGCAGTCAAAAGGCTATCAAAAGCTTCTAGTCAAGGCTCAGAGGAGTTTAAGAATGAAGTAACATTCATAGCTAAATTGCAGCATTGCAACCTTGTAAGACTTGTGGCATGCTGCTTGGACGAAAATGAAAAGATACTGGTTTATGAGTATTTGTCAAATGCAAGTCTTGACTTTCACCTATTTGATGATGAAAAAAGGAAGCAACTTGATTGGAAACTAAGGTCAAGCATAATCAATGGAATAGCAAGAGGTCTTTTATACCTTCATGAGGATTCTAGACTCAAGGTAATTCACAGAGATCTCAAAGCTAGTAATGTTCTGTTAGATGATGAAATGAATCCGAAGATATCAGATTTTGGATTAGCAAGAGCATTTGAAAATGGTCAGAACCAGGCAAATACAAACCGAGTAATGGGCACTTATGGATACATGGCTCCGGAATATGCTATGGAAGGATTGTTTTCAATGAAATCTGATGTTTTCAGCTTTGGAGTACTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTTTTTCTATCAGAACATGGTCAGAGTCTTCTTTTATATAGTTGGAGAATGTGGTGTGCAGGAAAATGCTTGGAATTGATGGATCCAGTGTTAGAAAATTCCTACATATCCAATGAAGTTGAGAAGTTTATACAGATTGGTTTATTGTGTGTTCAAGAAGCAGCAACAACTAGACCAACCATGTCCACTATCATGGTATTGTTGGCAAGTGATGTGATGAACATTCCAAAACCCAACAAACCTGCATTCTCAGTTGGAAGAATGACCTCAGTGGAAACTTCTGCTACTGAGAGTTCCAAAAATATTTCCATTAATGATGCATCTATCTCTAGCATTGCACCAAGGTAA | 1959 | 0.4028 | MGMGKPKTELNVRSLYFFVFMFLLSFKSLVTKAQPPFYLGDDCDFTPQKPLSNAYKTNINNMLSWLSSDAATSKGYNYKTIGNSTPLYGLYDCRGDVVGYFCQFCVSAASRRVLQHCPNRVSAVMYYNFCILRYSNQNFIGNVTINHPRHHVGNKSVSDAEEIQKGEDFMRSLIRKATVETNMLYYMDGFNLSSTQRRYGLVQCTRDLTSERCRQCLEAMLAQVPKCCEQKLGWLVGTASCHIKYDDYMFYLFDNQSYIVPGLTAKQGDGSKSRNLIIGLSVVGLVALCLSIYCLCYWNRVRKDGLITDTIPLSAYTNLPIIPLITILESTDNFSETSKLGEGGFGPVYKGILPDGRQVAVKRLSKASSQGSEEFKNEVTFIAKLQHCNLVRLVACCLDENEKILVYEYLSNASLDFHLFDDEKRKQLDWKLRSSIINGIARGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFENGQNQANTNRVMGTYGYMAPEYAMEGLFSMKSDVFSFGVLVLEIICGKKNSGFFLSEHGQSLLLYSWRMWCAGKCLELMDPVLENSYISNEVEKFIQIGLLCVQEAATTRPTMSTIMVLLASDVMNIPKPNKPAFSVGRMTSVETSATESSKNISINDASISSIAPR | 652 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00325 | 652 | Gene3D | Phosphorylase Kinase; domain 1 | 308 | 409 | - | - | |
Viun11g00325 | 652 | SMART | serkin_6 | 334 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00325 | 652 | Pfam | Protein tyrosine and serine/threonine kinase | 337 | 603 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00325 | 652 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 149 | 250 | - | - | |
Viun11g00325 | 652 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 455 | 467 | IPR008271 | GO:0004672|GO:0006468 | |
Viun11g00325 | 652 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 52 | 648 | - | - | |
Viun11g00325 | 652 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 307 | 409 | - | - | |
Viun11g00325 | 652 | ProSiteProfiles | Protein kinase domain profile. | 334 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00325 | 652 | Gene3D | Transferase(Phosphotransferase) domain 1 | 410 | 614 | - | - | |
Viun11g00325 | 652 | CDD | STKc_IRAK | 340 | 601 | - | - | |
Viun11g00325 | 652 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 39 | 138 | - | - | |
Viun11g00325 | 652 | Gene3D | - | 43 | 139 | IPR038408 | - | |
Viun11g00325 | 652 | Gene3D | - | 149 | 250 | IPR038408 | - | |
Viun11g00325 | 652 | ProSiteProfiles | Gnk2-homologous domain profile. | 36 | 139 | IPR002902 | - | |
Viun11g00325 | 652 | Pfam | Salt stress response/antifungal | 51 | 137 | IPR002902 | - | |
Viun11g00325 | 652 | Pfam | Salt stress response/antifungal | 168 | 248 | IPR002902 | - | |
Viun11g00325 | 652 | ProSiteProfiles | Gnk2-homologous domain profile. | 145 | 250 | IPR002902 | - | |
Viun11g00325 | 652 | FunFam | Liguleless narrow1 | 410 | 613 | - | - | |
Viun11g00325 | 652 | SUPERFAMILY | Protein kinase-like (PK-like) | 318 | 633 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00325 | Viun-Chr11 | 2713598 | 2716901 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g00325 | 17 | 652 | Receptor kinase-like Gene Family | AT4G05200 | 40.896 | 5.26e-166 | 489 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun11g00325 | PK_Tyr_Ser-Thr | 1.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g00325 | - | - | vum:124821055 | 1231.47 |