Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00324 ATGCCGGTCCTCGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTTCAAGTGCTGTTTGACAAGCTGGATTCCCATCAAGTTCTGGACTACTTTCGTGGGAGAAAGCTCGATGAGAAGCTGCTGAAAAATTTAAGGAGGAAGTTGGTGTCCATCAATGCTGTGGTTGATGATGCAGAATTAAAGCAGTTCACTGATGCATATGTTAAAGCGTGGCTTGATGAGGTCAGAGACGTGTTGTTTGACGCAGAGGATCTGCTGGAGGAAATAGACTATGAATTCTCCAAAAGTGCATCACAACTTGAATACCAGAGCAGTGCTAGCAAGGTATGCAGTTTTGAATCCAAGCTCAAAGAAGTTCTTGATGACCTTGAATCTCTTTTAAACCAAAAGGATGATCTAGGTCTGAAAAAAGCTGCTAGTGTTAGATCCGAATTGGGTAATAAAGTGTTAGAGAGAAAAAATGAATCCTCATCGTTGGTGGCTGACGATGTTTTTTATGGCAGAGATGATGACAAAGAAATTATCCTTAATTGGCTGACATCAGACAGTAACAATCATAACCAGCTGTCAATACTTTCTATTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCCCAACATGTATACAATGACCCAAAGATTAAAGAAGCTAGATTTCATGAAAAAGCTTGGGTTTGTATTTCTGATGAATTTGATGTTTTGAAAGCATCTAAAGCAATTATTGGGGCTTTCACTAAATCAAAAGATGATAGTGAAACCATAGAAATGGTTCATGGAAAAATGAAAGAAAAGTTAACAGGTAAGAAGTTTCTTCTGGTTCTGGATGATGTTTGGAATGAAGACCGAAACCAATGGAAAGCATTACAAACTCCTCTTAGGTGTGGAGCTAAGGGAAGTAAAATTCTAGTCACAACACGCAGTAACAAAGTTGCTTCTATCATTCAGTCAGGTTACATACACCAACTAAAGCAATTGCAGGAAGATCACAGCTGGCACGTTTTCGCCAAACATGCATTCCAAGATGAAAACTCTATGTTGAATTCTGAGTTGGAGGAGATTGGCATGAAGATAGTTGAAAAGTGCAAAGGATTGCCTCTGGCACTTGAAACGTTGGGATGTCTTTTACACACAAAGTCATCTGTCTCAGAGTGGGAAGGTGTATTGAAAAGCGAGACATGGGACTTAGCGATAGAAGATAGTAAAATCATCCCCGCTTTGTTGTTGAGCTATTACCATCTTCCTTCTAATCTCAAAAGATGTTTCGCTTTTTGTGCATTATTACCCAAAGACCGTATGTTTGACAAGGAGAGTATAATTCTCTTATGGATGGCTCAAAATTTTCTACAATGCTCTCAATGGAGTAAGTCTCCAGAAGAAGTAGGTGAACAATACTTTAATGATCTATTATCGAGGTCATTCTTCCAACAATTAGACAACGAAATGTCCTACGAAACACATTTTATCAAACTCAACAAAAAACTTTTTATCATGCACGACCTTCTCAATGATTTGGCCAAATATGTCTCTGGTGAGATGTGTTTCAGGTTGGGAGTTGATAGAGCAGAAAAAGTACCAAAGACAACCCGTCACTTTTCATCTGTGTTTAATCTTCTTAAATATAGTGAGTGTAGGAGTTTATGTGATGCTAAAAGGCTACGGACATTTCTTTCTATAAATGGGAATTGTGGGATTTCAATACAGGAGTTGATCTCCAACTTTAAGTTCTTACGAGTCTTATCTTTGGAGAGGTGTTTTAACATAGAAGAGGTGCCTAACACTATAGGCAATCTTATACATCTCCGTTCATTAAACCTTTCAGGTACCAAAATAGAGAGACTTCCCGACTCAACATGTTCACTGTGTAACTTGCAACTGTTGAAGCTAAACCATTGCTTCAATTTGCAGGAGCTGCCATCGACTTTGCACGAACTCACCAATTTACGCCGCTTTGAATTTGAGGGAACTCCTTTAAGAAAGGCTCCACTGCTTTTAGGAAAATTGAAGAATCTTCAAGTATGGATGGGTGAGTTTGAGGTTGGCAAAAGTAACGAGTCCAGTATTCAACAACTAGGAGAACTTAATCTTCATGGGCGACTGTCCATTAGTCATCTTGAAAATATTGTGAACCCTAGTGATGCATTGGCAGTGAATTTGAAGGATAAAACACATCTTATTAGGCTATGTTTAGAATGGGATTTCAAGCAAAATATCGATGATTCAAGGAAAGAAAGAGAAATACTTGAGAATCTGCAACCTTCCAGACATTTGGAGCACTTGTCAATCGTTGGCTATGGTGGTACAGGGTTTCCTCGTTGGTTATCTGACAACTCTCTATCAAATGTGGTGTCCTTAAGCTTGAGTAACTGTAAATATTGTCAATCGTTGCCTTCCCTTGGAATTTTGACATTTCTCAAGCACTTGACAATTGACGGCCTTCATCATATAGTGAAGATTAATGCTGATTTTTACGGGAATAGCTCTTCTTCATTTGCATCCTTGAAAATGTTGGACATCTCTAATATGAAAGAATTGGAAGAATGGCAATGCATGACAGGGGCTTTTCCAAATCTTCAGAGTCTTTATGTGAGGTATTGTCCCAAGCTGAAAGGGCACTTGCCAGAACAACTTTCTTGTTTGAAGGAACTAACTATTGAAAGCTGTGAACAACTTGTGGCTTCGATTCCCAGGGCGGCAATAGAAATTCATAATGTGAACATGCAACCATCTTCATTTGATATGACAGGGCCCCTCCTATCTGATATTCCTCTTGAACTCTTGCGTATTGTTTTTTGTCCGGGCATGAATATTCCCATAAACCATTGCTACCATTCCCTTAAGGAATTGGAGATCATTCATGGTTGTGACTCTCTCACGACCTTCCCTCTAGACCTATTCCCAAAACTCTGCAACCTTGAATTAGACGTGTGTCGTAACCTACAAATGATATCACAAGGTCACCCTCATAATAATTTGAAGAGTTTGAAAATTGAAAAATGCTCTCAATTTCAATCCTTTCCCAATGAAGGATTATTTGCACCAGAATTGAAGATACTTTTTATTGAAGGATTGGAGAAATTGAAATCAATGCCTAAACGCATGTCTACCCTCCTTCCATCTCTTAATCACGTGAACATAAACGACTGTCCGGGGGTGGAGTTGTCCGAGGGGTGTTTGCCATCAAATCTAAAAGAAATGAATCTCTGGAATTGCTCCAAACTTGTTGCCTCCCTAAAGGGGGCTTGGGGAACCAACCCTTCCCTAGAATGCTTGCATATTGCTGAAATGGATGTGGAGTTTTTTCCGGGTGAAGGTTTGCTTCCACTCTCTCTTAGTACTCTAGGGATATATTGTTGTCCAAATCTTAAGAAACTGGACTACATGGGTCTCTGTCACCTCTCCTCTCTTCAGAAATTGGATCTTAGTAATTGTCCCAGCCTCCAATGCTTGCCAGAGGAGGGTCTGCCCAAATCCATTTTAGAACTCAGAATTAGCCATTGTCCGTTGCTCAAACAGTGCTGCAGGAAACAAGAAGGTGAAGACTGGGAAAAGATTGCTCACATTAAAACCATATGGGTAGATTGA 3588 0.3983 MPVLETLGGALFGAVLQVLFDKLDSHQVLDYFRGRKLDEKLLKNLRRKLVSINAVVDDAELKQFTDAYVKAWLDEVRDVLFDAEDLLEEIDYEFSKSASQLEYQSSASKVCSFESKLKEVLDDLESLLNQKDDLGLKKAASVRSELGNKVLERKNESSSLVADDVFYGRDDDKEIILNWLTSDSNNHNQLSILSIVGMGGMGKTTLAQHVYNDPKIKEARFHEKAWVCISDEFDVLKASKAIIGAFTKSKDDSETIEMVHGKMKEKLTGKKFLLVLDDVWNEDRNQWKALQTPLRCGAKGSKILVTTRSNKVASIIQSGYIHQLKQLQEDHSWHVFAKHAFQDENSMLNSELEEIGMKIVEKCKGLPLALETLGCLLHTKSSVSEWEGVLKSETWDLAIEDSKIIPALLLSYYHLPSNLKRCFAFCALLPKDRMFDKESIILLWMAQNFLQCSQWSKSPEEVGEQYFNDLLSRSFFQQLDNEMSYETHFIKLNKKLFIMHDLLNDLAKYVSGEMCFRLGVDRAEKVPKTTRHFSSVFNLLKYSECRSLCDAKRLRTFLSINGNCGISIQELISNFKFLRVLSLERCFNIEEVPNTIGNLIHLRSLNLSGTKIERLPDSTCSLCNLQLLKLNHCFNLQELPSTLHELTNLRRFEFEGTPLRKAPLLLGKLKNLQVWMGEFEVGKSNESSIQQLGELNLHGRLSISHLENIVNPSDALAVNLKDKTHLIRLCLEWDFKQNIDDSRKEREILENLQPSRHLEHLSIVGYGGTGFPRWLSDNSLSNVVSLSLSNCKYCQSLPSLGILTFLKHLTIDGLHHIVKINADFYGNSSSSFASLKMLDISNMKELEEWQCMTGAFPNLQSLYVRYCPKLKGHLPEQLSCLKELTIESCEQLVASIPRAAIEIHNVNMQPSSFDMTGPLLSDIPLELLRIVFCPGMNIPINHCYHSLKELEIIHGCDSLTTFPLDLFPKLCNLELDVCRNLQMISQGHPHNNLKSLKIEKCSQFQSFPNEGLFAPELKILFIEGLEKLKSMPKRMSTLLPSLNHVNINDCPGVELSEGCLPSNLKEMNLWNCSKLVASLKGAWGTNPSLECLHIAEMDVEFFPGEGLLPLSLSTLGIYCCPNLKKLDYMGLCHLSSLQKLDLSNCPSLQCLPEEGLPKSILELRISHCPLLKQCCRKQEGEDWEKIAHIKTIWVD 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00324 1195 Coils Coil 117 137 - -
Viun11g00324 1195 PANTHER DISEASE RESISTANCE PROTEIN RP 42 943 IPR044974 GO:0006952
Viun11g00324 1195 Gene3D Ribonuclease Inhibitor 540 934 IPR032675 -
Viun11g00324 1195 ProSiteProfiles Leucine-rich repeat profile. 601 622 IPR001611 GO:0005515
Viun11g00324 1195 Pfam Rx N-terminal domain 13 99 IPR041118 -
Viun11g00324 1195 Gene3D - 411 509 IPR036388 -
Viun11g00324 1195 Gene3D Ribonuclease Inhibitor 1014 1180 IPR032675 -
Viun11g00324 1195 PRINTS Disease resistance protein signature 192 207 - -
Viun11g00324 1195 PRINTS Disease resistance protein signature 266 280 - -
Viun11g00324 1195 PRINTS Disease resistance protein signature 830 846 - -
Viun11g00324 1195 PRINTS Disease resistance protein signature 363 377 - -
Viun11g00324 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 426 IPR027417 -
Viun11g00324 1195 SUPERFAMILY L domain-like 928 1186 - -
Viun11g00324 1195 SUPERFAMILY L domain-like 499 893 - -
Viun11g00324 1195 Gene3D - 146 319 IPR027417 -
Viun11g00324 1195 FunFam Probable disease resistance protein At1g61300 148 319 - -
Viun11g00324 1195 Gene3D - 16 128 - -
Viun11g00324 1195 Pfam NB-ARC domain 170 391 IPR002182 GO:0043531
Viun11g00324 1195 Coils Coil 42 62 - -
Viun11g00324 1195 Gene3D - 326 410 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00324 Viun-Chr11 2697110 2701891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00324 193 510 WRKY Transcription Factor Family AT5G45050 25.364 4.01e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00324 - - vun:114168932 2402.48