Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00310 | ATGATAGGAATGCAGACAATTTGTTTTACTTTCTTGTTACTGCTGAATTTCAGGTCATTCATTACAAAGGCTGAAGAACAGACATACCTGGGAAGTAGCTGCAATAACACCACCCAACAAACTCTCAGCACTGCATACCAAACCAACCTTGATAGCATCCTGACCTGGATGTCCTCAGATTCAGCCACAAGCAATGGTTACAACATCACCACCATAGGCACTAACAATAGCTCTGTGTACGGCCTCTATTATTGTGGGGGTGGCTTGGCTGGATATTTTTGTCGAGTTTGTATTTCCACTGCTGCCAGAGAAGCCCCTCAGCTCTGCTCCAATAGAGTGTCTGCTGTGGTGTGGAATGATTACTGCCTTATAAGGTACTCAAACGAGAACTTCTTTGGGAAAGCTATGACATATCCAACATGGCATATTCTTGGAACAAGAAACATATCGAACATAACAGAGATTCAGATAGGTGAGGATTTTTTGAGAAGTTTGATCAGAAAAGCAACTAATGGAACCAACCAGTTGTACTATAAGGATGGATTCAATTTGAGTGCCACTGAGAGTAGGTATGCCGTGGTGCAATGCTCTAGAGATCTCACAAATGAAGTGTGCAGACAATGTTTGGAGGACATACTAGCTGAACTTCCTAAATGTTGTGAACAAAAACTGGCATGGAATATTTGGTCTGGAAGTTGTTTGATTAGGTATGATGATTATATGTTCTACCTTCTTAACACCCAACCACCTTCAGCTCCTGCTCCCAATGTACAAGATAAACAAGGGAATGATAAGAGGTCAAAAATATTGCTCATTACCTTCAGTGTGACTGGGCCAATAATTGTACTATGTTTCAGCGTATATTGCTTCTGGCACAGGAAAAGAGTGAGAAAAGAACGGCTTCCTCTACCTTCATTTCACAAAATTCAACCAGAGGAAATGTGGAACACTGACCTGCCCAGAATCCCATTAATCACAATTCTAGAGAGTACTGATAACTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTCGGCTCCGTTTACAAGGGAACTCTGCCTGATGGAACGCAAATTGCAGTAAAAAGACTATCAAAATTTTCTGGTCAAGGCTCGGAGGAGTTCAAAAATGAAGTAACGTTTATAGCTAAATTGAGGCATCGTAACCTTGTAAGACTTTTGGCATGTTGCTCGGAGGGTTATGAAAAGATACTCATATATGAGTATTTGCCGAATAAAAGTCTCGACTTTCACCTATTTGATGTTGAGAGAAAAAAACAATTTGATTGGAAACTTAGATTAAGCATTATCAATGGAATAGCAAGAGGTATGTTATACCTTCATGAGGACTCTCAACTGAGAGTAATTCATAGAGATCTCAAAGCCAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAGTGGGACAGAACCAAGCAAATACAAAACGAGTAATGGGCACTTATGGATACATGGCTCCTGAATATGCTATGGAAGGACTATTTTCCATGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAATGGTGAATTCTACCTGTCAGATGGTCAAAGTCTCCTTGTATACGCTTGGAGAATATGGTATGAAGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCAAAGGCAGTGAAGTAGGGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAATGATAGACCAACCATGTCCGATGTTGTTGTCATGCTGGCGAGTGACACAGTGGCCATTCCAAAACCCAAATATCCAGCATTTTCAGTTGGAAGAATGGCCTCAAAGATAGTCTCTACATCAAGAACTTCCGAGAATCTTTCCATTCATGATATAACAACCTCCATCACTTTACCTAGGTAA | 1956 | 0.4018 | MIGMQTICFTFLLLLNFRSFITKAEEQTYLGSSCNNTTQQTLSTAYQTNLDSILTWMSSDSATSNGYNITTIGTNNSSVYGLYYCGGGLAGYFCRVCISTAAREAPQLCSNRVSAVVWNDYCLIRYSNENFFGKAMTYPTWHILGTRNISNITEIQIGEDFLRSLIRKATNGTNQLYYKDGFNLSATESRYAVVQCSRDLTNEVCRQCLEDILAELPKCCEQKLAWNIWSGSCLIRYDDYMFYLLNTQPPSAPAPNVQDKQGNDKRSKILLITFSVTGPIIVLCFSVYCFWHRKRVRKERLPLPSFHKIQPEEMWNTDLPRIPLITILESTDNFSEASKLGEGGFGSVYKGTLPDGTQIAVKRLSKFSGQGSEEFKNEVTFIAKLRHRNLVRLLACCSEGYEKILIYEYLPNKSLDFHLFDVERKKQFDWKLRLSIINGIARGMLYLHEDSQLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEVGQNQANTKRVMGTYGYMAPEYAMEGLFSMKSDVFSFGVLVLEIICGRKNGEFYLSDGQSLLVYAWRIWYEGKCLELMDPMLEKSFKGSEVGRCIQIGLLCVQEDANDRPTMSDVVVMLASDTVAIPKPKYPAFSVGRMASKIVSTSRTSENLSIHDITTSITLPR | 651 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00310 | 651 | Pfam | Salt stress response/antifungal | 161 | 240 | IPR002902 | - | |
Viun11g00310 | 651 | Pfam | Salt stress response/antifungal | 34 | 128 | IPR002902 | - | |
Viun11g00310 | 651 | Gene3D | Transferase(Phosphotransferase) domain 1 | 410 | 611 | - | - | |
Viun11g00310 | 651 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 409 | - | - | |
Viun11g00310 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 137 | 242 | IPR002902 | - | |
Viun11g00310 | 651 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 37 | 641 | - | - | |
Viun11g00310 | 651 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 455 | 467 | IPR008271 | GO:0004672|GO:0006468 | |
Viun11g00310 | 651 | Gene3D | - | 26 | 131 | IPR038408 | - | |
Viun11g00310 | 651 | Gene3D | - | 142 | 242 | IPR038408 | - | |
Viun11g00310 | 651 | FunFam | cysteine-rich receptor-like protein kinase 10 | 410 | 611 | - | - | |
Viun11g00310 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 28 | 131 | IPR002902 | - | |
Viun11g00310 | 651 | ProSiteProfiles | Protein kinase domain profile. | 334 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00310 | 651 | CDD | STKc_IRAK | 340 | 604 | - | - | |
Viun11g00310 | 651 | ProSitePatterns | Protein kinases ATP-binding region signature. | 340 | 362 | IPR017441 | GO:0005524 | |
Viun11g00310 | 651 | SMART | serkin_6 | 334 | 609 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00310 | 651 | Pfam | Protein tyrosine and serine/threonine kinase | 338 | 603 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00310 | 651 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 30 | 130 | - | - | |
Viun11g00310 | 651 | SUPERFAMILY | Protein kinase-like (PK-like) | 308 | 604 | IPR011009 | - | |
Viun11g00310 | 651 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 295 | 409 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00310 | Viun-Chr11 | 2620874 | 2624208 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g00310 | 9 | 651 | Receptor kinase-like Gene Family | AT4G05200 | 41.493 | 7.44e-178 | 520 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun11g00310 | PK_Tyr_Ser-Thr | 5.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g00310 | - | - | pvu:PHAVU_011G194300g | 983.786 |