Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00310 ATGATAGGAATGCAGACAATTTGTTTTACTTTCTTGTTACTGCTGAATTTCAGGTCATTCATTACAAAGGCTGAAGAACAGACATACCTGGGAAGTAGCTGCAATAACACCACCCAACAAACTCTCAGCACTGCATACCAAACCAACCTTGATAGCATCCTGACCTGGATGTCCTCAGATTCAGCCACAAGCAATGGTTACAACATCACCACCATAGGCACTAACAATAGCTCTGTGTACGGCCTCTATTATTGTGGGGGTGGCTTGGCTGGATATTTTTGTCGAGTTTGTATTTCCACTGCTGCCAGAGAAGCCCCTCAGCTCTGCTCCAATAGAGTGTCTGCTGTGGTGTGGAATGATTACTGCCTTATAAGGTACTCAAACGAGAACTTCTTTGGGAAAGCTATGACATATCCAACATGGCATATTCTTGGAACAAGAAACATATCGAACATAACAGAGATTCAGATAGGTGAGGATTTTTTGAGAAGTTTGATCAGAAAAGCAACTAATGGAACCAACCAGTTGTACTATAAGGATGGATTCAATTTGAGTGCCACTGAGAGTAGGTATGCCGTGGTGCAATGCTCTAGAGATCTCACAAATGAAGTGTGCAGACAATGTTTGGAGGACATACTAGCTGAACTTCCTAAATGTTGTGAACAAAAACTGGCATGGAATATTTGGTCTGGAAGTTGTTTGATTAGGTATGATGATTATATGTTCTACCTTCTTAACACCCAACCACCTTCAGCTCCTGCTCCCAATGTACAAGATAAACAAGGGAATGATAAGAGGTCAAAAATATTGCTCATTACCTTCAGTGTGACTGGGCCAATAATTGTACTATGTTTCAGCGTATATTGCTTCTGGCACAGGAAAAGAGTGAGAAAAGAACGGCTTCCTCTACCTTCATTTCACAAAATTCAACCAGAGGAAATGTGGAACACTGACCTGCCCAGAATCCCATTAATCACAATTCTAGAGAGTACTGATAACTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTCGGCTCCGTTTACAAGGGAACTCTGCCTGATGGAACGCAAATTGCAGTAAAAAGACTATCAAAATTTTCTGGTCAAGGCTCGGAGGAGTTCAAAAATGAAGTAACGTTTATAGCTAAATTGAGGCATCGTAACCTTGTAAGACTTTTGGCATGTTGCTCGGAGGGTTATGAAAAGATACTCATATATGAGTATTTGCCGAATAAAAGTCTCGACTTTCACCTATTTGATGTTGAGAGAAAAAAACAATTTGATTGGAAACTTAGATTAAGCATTATCAATGGAATAGCAAGAGGTATGTTATACCTTCATGAGGACTCTCAACTGAGAGTAATTCATAGAGATCTCAAAGCCAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAGTGGGACAGAACCAAGCAAATACAAAACGAGTAATGGGCACTTATGGATACATGGCTCCTGAATATGCTATGGAAGGACTATTTTCCATGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAATGGTGAATTCTACCTGTCAGATGGTCAAAGTCTCCTTGTATACGCTTGGAGAATATGGTATGAAGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCAAAGGCAGTGAAGTAGGGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAATGATAGACCAACCATGTCCGATGTTGTTGTCATGCTGGCGAGTGACACAGTGGCCATTCCAAAACCCAAATATCCAGCATTTTCAGTTGGAAGAATGGCCTCAAAGATAGTCTCTACATCAAGAACTTCCGAGAATCTTTCCATTCATGATATAACAACCTCCATCACTTTACCTAGGTAA 1956 0.4018 MIGMQTICFTFLLLLNFRSFITKAEEQTYLGSSCNNTTQQTLSTAYQTNLDSILTWMSSDSATSNGYNITTIGTNNSSVYGLYYCGGGLAGYFCRVCISTAAREAPQLCSNRVSAVVWNDYCLIRYSNENFFGKAMTYPTWHILGTRNISNITEIQIGEDFLRSLIRKATNGTNQLYYKDGFNLSATESRYAVVQCSRDLTNEVCRQCLEDILAELPKCCEQKLAWNIWSGSCLIRYDDYMFYLLNTQPPSAPAPNVQDKQGNDKRSKILLITFSVTGPIIVLCFSVYCFWHRKRVRKERLPLPSFHKIQPEEMWNTDLPRIPLITILESTDNFSEASKLGEGGFGSVYKGTLPDGTQIAVKRLSKFSGQGSEEFKNEVTFIAKLRHRNLVRLLACCSEGYEKILIYEYLPNKSLDFHLFDVERKKQFDWKLRLSIINGIARGMLYLHEDSQLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEVGQNQANTKRVMGTYGYMAPEYAMEGLFSMKSDVFSFGVLVLEIICGRKNGEFYLSDGQSLLVYAWRIWYEGKCLELMDPMLEKSFKGSEVGRCIQIGLLCVQEDANDRPTMSDVVVMLASDTVAIPKPKYPAFSVGRMASKIVSTSRTSENLSIHDITTSITLPR 651
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00310 651 Pfam Salt stress response/antifungal 161 240 IPR002902 -
Viun11g00310 651 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Viun11g00310 651 Gene3D Transferase(Phosphotransferase) domain 1 410 611 - -
Viun11g00310 651 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
Viun11g00310 651 ProSiteProfiles Gnk2-homologous domain profile. 137 242 IPR002902 -
Viun11g00310 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 641 - -
Viun11g00310 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Viun11g00310 651 Gene3D - 26 131 IPR038408 -
Viun11g00310 651 Gene3D - 142 242 IPR038408 -
Viun11g00310 651 FunFam cysteine-rich receptor-like protein kinase 10 410 611 - -
Viun11g00310 651 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Viun11g00310 651 ProSiteProfiles Protein kinase domain profile. 334 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00310 651 CDD STKc_IRAK 340 604 - -
Viun11g00310 651 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Viun11g00310 651 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00310 651 Pfam Protein tyrosine and serine/threonine kinase 338 603 IPR001245 GO:0004672|GO:0006468
Viun11g00310 651 FunFam Cysteine-rich receptor-like protein kinase 28 30 130 - -
Viun11g00310 651 SUPERFAMILY Protein kinase-like (PK-like) 308 604 IPR011009 -
Viun11g00310 651 FunFam Cysteine-rich receptor-like protein kinase 10 295 409 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun11g00310 Viun-Chr11 2620874 2624208 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00310 9 651 Receptor kinase-like Gene Family AT4G05200 41.493 7.44e-178 520
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00310 PK_Tyr_Ser-Thr 5.5e-47 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00310 - - pvu:PHAVU_011G194300g 983.786