Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00309 ATGGCTCCTGAATATGCTATGGATGGACTATTTTCAGTGAAATCTGATATTTTCAGTTTTGGAGTTCTTGTTCTAGAAATCATTTGCGGGAGAAAGAACGGTGGATTCTACATGTCAGATGGTCAAACTCTCCTTGTATACGCTTGGAGAACATGGTCTGAAGGAAAATGTTTGGAAGTGATGGATCCAATGCTGGAAAAATCCTTTATAGGAAGTGAAGTAGAGAGGTGCATACATATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAAGCATGTCCGATGTTGTGGTAATGCTGGCGAGTGACACAGTGGCCATTCCAAAACCAAAGCACCCAGCATTTTCAATTGGAAGGATGGCCTCAGAGGAAGTCTCTACATCAAAAAGTTCCAAGAATTTTTCCGTTAATGATATAACATCCTCGATTACTTTACCGAGGTAA 450 0.4044 MAPEYAMDGLFSVKSDIFSFGVLVLEIICGRKNGGFYMSDGQTLLVYAWRTWSEGKCLEVMDPMLEKSFIGSEVERCIHIGLLCVQEDARDRPSMSDVVVMLASDTVAIPKPKHPAFSIGRMASEEVSTSKSSKNFSVNDITSSITLPR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00309 149 Pfam Domain of unknown function (DUF3403) 104 149 IPR021820 GO:0004674
Viun11g00309 149 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Viun11g00309 149 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Viun11g00309 149 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00309 149 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Viun11g00309 149 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00309 Viun-Chr11 2615995 2616853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00309 1 149 Receptor kinase-like Gene Family AT4G23150 50.000 2.12e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00309 PK_Tyr_Ser-Thr 3.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00309 - - pvu:PHAVU_011G194300g 248.054