Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00302 ATGTTTCAATCATTGTGGCAAATAACAAAATTAAGCAAGCACTTCATGATAGGAACACAGGGAAAGGTGAGATCAATATGCTTTAGTTTCTTGTTATTACTGAGTTTCAAATCATTCAGTACAAAGGCCAAAGCACAGTCCCTGGGAAGTAACTGCGAAAACACCACCCAACAGACTCTCACCGGTGCATACCAAACCAACCTTGATAGAATCCTAACATGGATGTCCTCGGATGCAGGCACAAGCAATGGTTATAACCACACCACCATAGGCACCAATAGCTCTGTGTATGGCCTTTATGATTGTGGTGGTGATGCGGTTGGATACTTTTGTCAATTTTGTATTTCCACTGCTGCAAGAGAAGCCCCTCAGCTCTGCTCCAATAGGGAGTCTGCTGTGGTGTGGAATGATTACTGCATTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTATGACATACCCAATATGGCATACTCTTGGAACAAAAAACATATCCAACACCACAGAGATTCAGATAGCTGAGGATTTTGTGAGAAGTTTGATCGGAAAGGCTACTAATGAAACCCACCAGTTGTACTATAAGGATGGCTTCAATTTGAGTGCCACTGAGAGTAGGTATGCCGTGGTGCAATGCACCAGAGATCTCACAAATGAAGGGTGCAGACAGTGTTTGGAGGACATACTGACTGAAGTTCCCAAATGTTGTGAACAAAAAGTAACATGGATGGTTTGGTCTGGAAGTTGTTTGATAAGGTATGATGATCATATGTTCTACCTTCTTGCCAACCAACCACCTTCAGCTCCCGCACCCAATCAGAAAACAGATAAACAAGGGGTTAATAACAGGACAAGAATATTGATCATTATCTTCAGTGTGATCGGGGCAATAATTGTACTATGTTTCAGCCTATATTGCATCTGGTACAGGAAAAGGGTGAGAAAAGCTAATTATAAAGAAAATACGAGGGATGGAGTTAGAGAAGAAGAGCTTCCTCTACCTTCATTTCATAAAATTCAATCGGAGGAAACGTGGAACACAGACCTGCCTAGAATTCCATTTATCACAATTTTACAGAGTACTGATAACTTTTCAGTAGCATCTAAATTAGGGGAAGGTGGATTCGGCCCTGTTTATAAGGGAAATCTACCTGATGGAAGGCAAATTGCAGTCAAAAGACTCTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTAATGTTTATAGCCAAATTGAGGCATCGCAACCTTGTAAGACTTTTGGCATGTTGCTTAGAGGAAAATGAAAAGATACTCGTATATGAGTATTTGCCGAATAAAAGTCTCGACTTTCACTTATTTGATGTTGAGAGAAGAAAACAATTCGATTGGAAACTAAGGTTAAGCATTATCCATGGAATAGCAAGAGGAATTTTATACCTTCACGAGGACTCTCAACTCAGAGTAATTCATAGAGATCTCAAAGCCAGCAACGTTCTACTAGACCTTGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTCGAAGTAGGACAGAACCAGGCAAATACAAAACGAGTAATGGGCACTTTAAATCATTTGCGGGAGAAAGAACGGTGGATTCTACATGTCAGATGGTCAAACTCTCCTTGTATACGCTTGGAGAACATGGTCTGA 1677 0.4055 MFQSLWQITKLSKHFMIGTQGKVRSICFSFLLLLSFKSFSTKAKAQSLGSNCENTTQQTLTGAYQTNLDRILTWMSSDAGTSNGYNHTTIGTNSSVYGLYDCGGDAVGYFCQFCISTAAREAPQLCSNRESAVVWNDYCIIRYSNEDFFGKAMTYPIWHTLGTKNISNTTEIQIAEDFVRSLIGKATNETHQLYYKDGFNLSATESRYAVVQCTRDLTNEGCRQCLEDILTEVPKCCEQKVTWMVWSGSCLIRYDDHMFYLLANQPPSAPAPNQKTDKQGVNNRTRILIIIFSVIGAIIVLCFSLYCIWYRKRVRKANYKENTRDGVREEELPLPSFHKIQSEETWNTDLPRIPFITILQSTDNFSVASKLGEGGFGPVYKGNLPDGRQIAVKRLSKFSGQGSEEFNNEVMFIAKLRHRNLVRLLACCLEENEKILVYEYLPNKSLDFHLFDVERRKQFDWKLRLSIIHGIARGILYLHEDSQLRVIHRDLKASNVLLDLDMNPKISDFGLARAFEVGQNQANTKRVMGTLNHLREKERWILHVRWSNSPCIRLENMV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00302 558 Gene3D Transferase(Phosphotransferase) domain 1 441 536 - -
Viun11g00302 558 Pfam Protein kinase domain 366 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00302 558 SUPERFAMILY Protein kinase-like (PK-like) 339 532 IPR011009 -
Viun11g00302 558 Gene3D Phosphorylase Kinase; domain 1 333 440 - -
Viun11g00302 558 Pfam Salt stress response/antifungal 176 256 IPR002902 -
Viun11g00302 558 Pfam Salt stress response/antifungal 52 145 IPR002902 -
Viun11g00302 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Viun11g00302 558 ProSiteProfiles Gnk2-homologous domain profile. 154 259 IPR002902 -
Viun11g00302 558 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 58 531 - -
Viun11g00302 558 FunFam Cysteine-rich receptor-like protein kinase 28 48 147 - -
Viun11g00302 558 Gene3D - 155 259 IPR038408 -
Viun11g00302 558 Gene3D - 44 148 IPR038408 -
Viun11g00302 558 ProSiteProfiles Protein kinase domain profile. 365 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00302 558 SMART serkin_6 365 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00302 558 ProSiteProfiles Gnk2-homologous domain profile. 46 148 IPR002902 -
Viun11g00302 558 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 441 532 - -
Viun11g00302 558 FunFam Cysteine-rich receptor-like protein kinase 10 328 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00302 Viun-Chr11 2603362 2606308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00302 28 547 Receptor kinase-like Gene Family AT4G05200 37.873 1.02e-115 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00302 Pkinase 8.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00302 - - pvu:PHAVU_011G194300g 754.592