Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00300 | ATGAGGATCAAGACAGAGATATTGATGAGCCCTATTAGGGTTAGTCTTAGTTTCACGTTCCTCCTTTTCACCACAGCAAGTGGTCAACCACCGATTTACATGTACAATTTTTGTGAGAACTCAACTCTCGTTAGCTCTTCATACAGAAGCAACGTTGAAAGCCTTCTCTCATGGGTAACCACAGACTCATTCAAAAGCGATGGATACAACTTCACCACCGTAAATAGCAACAGCCACAACAATGATGATGATGTCTATGGGTTGTACAGCTGCAGATACGACATGACAGGGTATTTTTGCCAGTTCTGCATCACCACTGCTGCCAGTGAACTCTCTCGGAGGTGTCCCAACGCTGTAAGAGCTATCATATGGTATGATATATGCATCATCCGTTACTCAAACCAAAGTTTCAATGCCAAAGTTAGTTTAACCCCAACATGGAATATTACAGGACCCAGAATAATCAAGGATTCATCCGAATCTAGGAAAGCTGTGGATTCTATGAATGATTTGATATGGAAAGCAACGGTAGAGACGAAGAAGTTTTGGGCAGTGGAAGAGTTTGATTGGGTTGAGAATGAAAAAAGATATGGTTGGGTGCAGTGTGATAGGGATATTAAAAATGATGAATGTGGTGATTGTCTGCATGCATTGTTAGATATATTTCCAGACTGTTGTTCAACACATGCACAGTGGGCAATTTTTGGTCCAAGTTGTGGCATCAGGATGGATGATGAGAAGTTCTACCAGACTTCAGGCAATGGAGGTTCTACTAAGTCAAGAAAGTTGATCATTTCCTTTAGTGTGTTGGGGTCTGTAGTTCTACTATGCTTCAGTGTCTACTGTTTCTGGTACAGGAAAAGAGTAAGAAGAGATAAGATGATGTTTGATGAGGAAAAATTGAATGGAGATCTGCCTATAATCCCATTAATCGCAGTTCTGCATAGTACTAATAACTTTTCAGAAGAATCTAAATTAGGGGAAGGTGGATTTGGCCCTGTATACAAGGGAATTCTACCAGATGGAAGGCAAATTGCAGTGAAAAGGCTCTCAAAATTTTCTGGTCAGGGCTCACAGGAGTTCAAGAATGAAGTAATGTTTATAGCCAAATTGCAACATCGTAACCTCGTGAGACTTTTGGGATGCTGCTTAGAGGAAAATGAGAATATACTTGTATATGAGTATATGTGTAATGCAAGCCTTGATTCTCATCTCTTTGGTGGCATAGAGAAGAGAAAGCAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAAAGGTATTTTATATCTTCATGAAGACTCTCGACTCAAAGTAATTCACAGAGATCTCAAAGGTAGTAATGTTCTATTAGACCATGAGATGAATCCCAAAATATCAGATTTTGGATTGGCCAGGGCCTTTGAAATAGGACAGAACCAAGCAAATACAAAACGAGTAGTGGGCACCTATGGATACATGGCTCCAGAGTATGCCATGGAAGGATTATTTTCCGTGAAATCTGATGTTTTCAGCTTTGGAGTTATTGTCCTAGAAATCATTTGTGGAAGAAAGAACAGTGGATTCCATCGATCAGAACATGGCCAAAGTCTTCTTTTATATGCTTGGAACATATGGTGTGAAGGAAGATGTTTGGAATTGATGGATCCAGCACTGATAAAATCCTTCATAGCCAGTGAGGTTGTGAAGTGCATACACGTTGGTTTGCTTTGTGTTCAACAAGATGCAGCAGATAGACCAACCATGTCAACGGTTGTTCTGATGCTAGGAAGTGACACAATGACCCTTCCAAAACCCAATCACCCTGCATATTCTGTTGGAAGATTGACCTCTAATGATGCATCAACTTCAAGAAGTTCCAAGAATCTCTCTATTAATGATGTAACATTCTCAACCGTTTTAGCAAGATAA | 1920 | 0.3984 | MRIKTEILMSPIRVSLSFTFLLFTTASGQPPIYMYNFCENSTLVSSSYRSNVESLLSWVTTDSFKSDGYNFTTVNSNSHNNDDDVYGLYSCRYDMTGYFCQFCITTAASELSRRCPNAVRAIIWYDICIIRYSNQSFNAKVSLTPTWNITGPRIIKDSSESRKAVDSMNDLIWKATVETKKFWAVEEFDWVENEKRYGWVQCDRDIKNDECGDCLHALLDIFPDCCSTHAQWAIFGPSCGIRMDDEKFYQTSGNGGSTKSRKLIISFSVLGSVVLLCFSVYCFWYRKRVRRDKMMFDEEKLNGDLPIIPLIAVLHSTNNFSEESKLGEGGFGPVYKGILPDGRQIAVKRLSKFSGQGSQEFKNEVMFIAKLQHRNLVRLLGCCLEENENILVYEYMCNASLDSHLFGGIEKRKQLDWKLRLSIINGIAKGILYLHEDSRLKVIHRDLKGSNVLLDHEMNPKISDFGLARAFEIGQNQANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIICGRKNSGFHRSEHGQSLLLYAWNIWCEGRCLELMDPALIKSFIASEVVKCIHVGLLCVQQDAADRPTMSTVVLMLGSDTMTLPKPNHPAYSVGRLTSNDASTSRSSKNLSINDVTFSTVLAR | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00300 | 639 | ProSiteProfiles | Gnk2-homologous domain profile. | 30 | 137 | IPR002902 | - | |
Viun11g00300 | 639 | Pfam | Domain of unknown function (DUF3403) | 594 | 639 | IPR021820 | GO:0004674 | |
Viun11g00300 | 639 | FunFam | Uncharacterized protein | 396 | 598 | - | - | |
Viun11g00300 | 639 | ProSiteProfiles | Gnk2-homologous domain profile. | 143 | 248 | IPR002902 | - | |
Viun11g00300 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 305 | 592 | IPR011009 | - | |
Viun11g00300 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 282 | 395 | - | - | |
Viun11g00300 | 639 | Pfam | Protein tyrosine and serine/threonine kinase | 323 | 589 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00300 | 639 | ProSiteProfiles | Protein kinase domain profile. | 320 | 607 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00300 | 639 | Gene3D | - | 148 | 248 | IPR038408 | - | |
Viun11g00300 | 639 | Gene3D | - | 32 | 137 | IPR038408 | - | |
Viun11g00300 | 639 | SMART | serkin_6 | 320 | 592 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00300 | 639 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 85 | 635 | - | - | |
Viun11g00300 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 396 | 601 | - | - | |
Viun11g00300 | 639 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 442 | 454 | IPR008271 | GO:0004672|GO:0006468 | |
Viun11g00300 | 639 | CDD | STKc_IRAK | 326 | 592 | - | - | |
Viun11g00300 | 639 | Pfam | Salt stress response/antifungal | 44 | 135 | IPR002902 | - | |
Viun11g00300 | 639 | Pfam | Salt stress response/antifungal | 181 | 244 | IPR002902 | - | |
Viun11g00300 | 639 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 285 | 395 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00300 | Viun-Chr11 | 2583442 | 2588762 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g00300 | 18 | 639 | Receptor kinase-like Gene Family | AT4G05200 | 40.390 | 2.24e-168 | 495 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun11g00300 | PK_Tyr_Ser-Thr | 2.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g00300 | - | - | var:108339138 | 1042.72 |