Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00298 ATGAAGAGTTTGGTTAGAAAAGCAACTGTAGAGACGAAGACATTTTGGGCAGTGGATGAGTTTGATTGGGTTGAGAATGAGAAAAGATATGGTTGGGTGCAGTGTGACAGAGGTACTAAAAATGATCAGTGTGGTGAGTGCTTGCATGCATTGTTAGACATATTTCCACAGTGTTGTTCCACAAATGTACAGTGGGCAATTTTTGGTCCAAGCTGTGGCATGAGGATGGATGATCAGAAATTCTACCAGAGTTCAGGCAATGAAGGTACTAGTAAGTCAAGAAAGTTGATCATTTCCTTTAGTGTGTCGGGGTTTGTAGCTCTACTATGCTTCGGTGTCTACTGCTTCTGGTACAGGAAAAGAGTCAGAAAAGATAAGATGATATTTGAAGAGGAAACATTGAATGGAGATCTGCCTTCTCTCCCATTAATCGCAGTTCTACATAGTACTAATAACTTTTCTGAAGCATCTAAATTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTGAAAAGGCTCTCACAATTTTCTGGTCAGGGCTCACAGGAGTTCAGGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGTAACCTTGTGAGACTTTTGGGGTGCTGCTTGGAGCAAAATGAGAAGATACTTATATATGAGTATATGTGTAATGCGAGCCTCGACTTTCACCTCTTTGGTGATGATGAGAAGAGAAAACAACTTGATTGGAAACTAAGATTAAACATTGTCAATGGAATAGCGAAAGGTATTTTATATCTTCATGAGGATTCTCGTCTCAAAGTGATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACAGTGAGATGAATCCCAAGATATCAGATTTTGGATTGGCCAGGGCCTTTGAAATAGGACAGAACCAAGCAAAGACTAAACGAGTAGTGGGCACCTATGGATACATGGCGCCAGAGTATGCTATGGAAGGATTATTTTCTGTGAAATCAGATGTATTCAGCTTTGGAGTTATTGTGCTAGAAATCATTTGTGGAAGAAAGAACAGTGGATTCCATCTATCAGAACATGGTCAAAGTCTTCTTTTATATGCTTGGAACATATGGTGTGCAGGAAAATATTTGGAATTGATGGATCCAACACTGATGAAATCCTTCATAGCCAGTGAAGTTGTGAAGTGCTTACACATTGGTTTGCTGTGTGTTCAACAAGATTTAGCAGATAGACCAACCATGTCTACGGTTGTTCTAATGCTAGGAAGTGACACAATGGTCCTTCCAAAACCCAACCACCCTGCATTTTCTGTTGGAAAATTGACCTCTAAAGAAGCATCAACTTTAAGAAGTTCCAACAATCTTTCTATTAATGATGTAACATTCTCAAGCGTTTTAGCAAGATAA 1419 0.3925 MKSLVRKATVETKTFWAVDEFDWVENEKRYGWVQCDRGTKNDQCGECLHALLDIFPQCCSTNVQWAIFGPSCGMRMDDQKFYQSSGNEGTSKSRKLIISFSVSGFVALLCFGVYCFWYRKRVRKDKMIFEEETLNGDLPSLPLIAVLHSTNNFSEASKLGEGGFGPVYKGILPDGRQIAVKRLSQFSGQGSQEFRNEVMFIAKLQHRNLVRLLGCCLEQNEKILIYEYMCNASLDFHLFGDDEKRKQLDWKLRLNIVNGIAKGILYLHEDSRLKVIHRDLKASNVLLDSEMNPKISDFGLARAFEIGQNQAKTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIICGRKNSGFHLSEHGQSLLLYAWNIWCAGKYLELMDPTLMKSFIASEVVKCLHIGLLCVQQDLADRPTMSTVVLMLGSDTMVLPKPNHPAFSVGKLTSKEASTLRSSNNLSINDVTFSSVLAR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00298 472 FunFam cysteine-rich receptor-like protein kinase 10 229 432 - -
Viun11g00298 472 Gene3D - 1 81 IPR038408 -
Viun11g00298 472 CDD STKc_IRAK 159 425 - -
Viun11g00298 472 SUPERFAMILY Protein kinase-like (PK-like) 138 425 IPR011009 -
Viun11g00298 472 Pfam Domain of unknown function (DUF3403) 427 472 IPR021820 GO:0004674
Viun11g00298 472 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 85 467 - -
Viun11g00298 472 Gene3D Phosphorylase Kinase; domain 1 115 228 - -
Viun11g00298 472 ProSiteProfiles Protein kinase domain profile. 153 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00298 472 Gene3D Transferase(Phosphotransferase) domain 1 229 432 - -
Viun11g00298 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Viun11g00298 472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 118 228 - -
Viun11g00298 472 ProSiteProfiles Gnk2-homologous domain profile. 1 81 IPR002902 -
Viun11g00298 472 Pfam Protein tyrosine and serine/threonine kinase 156 422 IPR001245 GO:0004672|GO:0006468
Viun11g00298 472 SMART serkin_6 153 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00298 Viun-Chr11 2563374 2567391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00298 7 472 Receptor kinase-like Gene Family AT4G05200 42.772 6.07e-138 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00298 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00298 - - vun:114170456 961.059