Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00285 ATGTTTAAGAACAATGAATCTCCCTCTCAAGGATTAACGCAACTTTCTCAGACTTCCAAAAATACTGTCGAAGAGGACTTTTTAACACTTACACCTAGAACCACCATTCAAGGTCTAAAAGATTGTAAAGAGGTCACCACTTACATATTGTTTGGAACAATTAAGCATATATTGGTTGACGATGACTGGTGGTATACTGCTTGTGTGTGTAACAAAGCTGTTTATCTAGATTCCAAGATGTTCTTTTGTGAGAAGTGTAACAAGCATGTTATAAAAGTCTTTCCAAGATATAGGATTAAGATCCGAGTTATTGACTCTTTCGATTCAACCACATTTGTCCTCTTTGATAGGGATGCAACTACCCTTTTCAAAAAAACTTGTGCTGATATGTTAGACACTCATGATAAGATGAATTCTTCTGGAAATTTGCCTAAGCAGTTTGATGAGTTAGTTGATAGAAGTCTGCTTTTTAAAGTGGAAAGTAGGAACGATCAGAATTTCAAACTTGAGCAGTCTTTCAGAGTGAAGAAAATATGTGTTGATGATGATATAATTGAGAAATTCAATGATTCTTTGTTGAAATCTGTGGATGTTTATACTGGGAATGGTGAGTTTAGTAGGGAAAAAATGCGTATAGTCAATGAGTCCACCGTTAATATTTCAGAGGATTTATTAGTTCGATTTACCAAAGAAACAATTGAGTGTGGATCCCAATCACCTGAACTAATCCAAGATAATCCAACCAACGATGATGCTAACAGTTCACATAAGAGAGAATCTGGAAAGAAGACTGCATCACTTGAATCCATCGAAGAAGACAATGTTCCATTGAAGCTTTTAAAAAGAAATATTAAGAAGGAAAAAACAGTGATTTGA 876 0.3482 MFKNNESPSQGLTQLSQTSKNTVEEDFLTLTPRTTIQGLKDCKEVTTYILFGTIKHILVDDDWWYTACVCNKAVYLDSKMFFCEKCNKHVIKVFPRYRIKIRVIDSFDSTTFVLFDRDATTLFKKTCADMLDTHDKMNSSGNLPKQFDELVDRSLLFKVESRNDQNFKLEQSFRVKKICVDDDIIEKFNDSLLKSVDVYTGNGEFSREKMRIVNESTVNISEDLLVRFTKETIECGSQSPELIQDNPTNDDANSSHKRESGKKTASLESIEEDNVPLKLLKRNIKKEKTVI 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00285 291 SUPERFAMILY Nucleic acid-binding proteins 31 166 IPR012340 -
Viun11g00285 291 Gene3D - 14 199 IPR012340 -
Viun11g00285 291 MobiDBLite consensus disorder prediction 251 267 - -
Viun11g00285 291 Pfam Replication factor-A C terminal domain 52 175 IPR013955 -
Viun11g00285 291 CDD RPA1_DBD_C 48 197 IPR047192 -
Viun11g00285 291 MobiDBLite consensus disorder prediction 237 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00285 Viun-Chr11 2442774 2444097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00285 49 175 Core DNA Replication Machinery Family AT5G08020 28.571 7.33e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00285 - - vun:114187459 558.91