Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00283 ATGCCTGTCCTTGAAACACTTGGTGGTGCTCTTTTCGGTGCTGTTCTTCAGCTGCTGTTTGACAAGCTGGACTCTCATCAAGTTTTGGGCTACTTCCGCCAGAGAGATCTCGATGAAAAGCAGCTGAAGAAGTTGAAGAGGAAGCTGATGGACATCAATGCTGTGATAGATGATGCAGAACAGAAGCAGTTCACTAATTCATTGGTCAAAGAATGGCTTGATGAGGTTAGAGACATCTTGTATGATGCAGAGGATCTGTTGGAGCAAATACACTATGAGTACTCCAAGACTAAGTTGGAAGCTGAATTCCATACCAGTTCAAGCAAGGTACACATTTTTGAATCTAAGATCATAGCACTTCTAGATGATCTAGAATCTCTTTTGAACCAAAGGATTGTTAGAGATTTCAAAATTTATAGTGGCGATAGATCTGGGTTGGGTAGTAAGGTGTCCGAGAAAAAAGTTGAATCAACGTCATTGGTGGTTGAAGAGGATATTTATGGCAGAGATGAGGACAAAGAAATGATCTTTAATTGGCTTATGTCTGACACTAATGACAATAAGCTGTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAAACCACACTTGCTCAACATGTATACAATGACATGAATACGAAGGAAGTTAAATTTGATGAAAAGGCTTGGGTTTGCGTTTCTGATGAATTTGATGTTTTCAAGTTAACCAGAGCAATTTTCGAGGCAATCCATAAGTCAACTGATGATAGTAGAAACCTAGATACGGTTCAGGGACGATTGAAAGAAAAGTTGACAGGAAGGAAGTTTCTCCTAGTTCTGGATGATGTCTGGAACGAAGACCGGGACCAATGGAAGTCATTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTATCACAACACGTAGTAACAAAGTTGCCTCTGCTGTGGGGTCAAACAATACGCACGAACTAAAGCAACTACGAGAAGATCACAGTTGGCAAGTTTTTGCTAAACATGCATTCCAAGATGAAAATTGTGAGTTGAATTCTGAGTTGAAGGAGATTGGCATGCAGATAGTTGAAAAGTGCAAAGGATTGCCTCTAGCCCTTGAAACGCTAGGATGTCTATTACGCACAAAGTCATCTGTTTCGGATTGGGAAGGTGTATTGAGAAGCAACATATGGGACTTGCCGATAGAAAATAGTAAAATCATGCCCGCTTTGTTGTTGAGCTACTACCACCTCCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCCTTATACCCCAAAGACCATCACTTTGACAAGGAGAAGTTAATTTTCTCATGGATGTCTCAAAATTTTCTACATTGCTCTCAAGAAAGTAAGTCTCTAGAAGATGTGGGTGAACATTACTTCAATGATCTATTATCAAGGTCATTCTTTCAACAAATAATTACCGACATCGAAACATATTTTGTCATGCACGACCTTCTCAATGATTTAGCAAAATATGTTTCCGGTGAAATCTGCTATAGTTTAGATGACAGAGAAAAAAGAATATCAAGGAAAACCCGTCACTTTTTAATGGCATTCGATCATGTTCAATATCGTGAGAGTTTATATGATGCAAAAGGGCTACGAACATTTATATGCATTTCGCACTACTGTATGATTTCAATACAAGAGTTGATCTCCAACTTTAAGTTCTTACGGGTCTTATCTTTGTATAGATGTTCTGAGGTGCCTGACACTATAGGCAATCTGATACATCTTCGTTCGTTAGACCTTTCATATACCTACATAGAGAGACTTCCCGACTCAACATCTTCACTTTGTAACTTGCAAGTATTGAAGCTAAATGGTTGTTTCTATTTGAAGGAGCTGCCCTCGACTTTGTATGAACTTACCAATTTGCGTCGCCTTGAGCTTATGGGAACTACTTTAATAAAGGTTCCACCGCTTTTAGGAAATTTGAAGAATCTTCAGGTATGGATGGATACGTTTGAGGTTGGCAAAAGTTGTGAGTTCAGTGTTCACCAACTACAAGAAGTTGATCTTCATGGAGAGCTGTCAGTTAGAAATCTTGAGAATATGGTGAACTGTTGTGCATTGGGAGCTGATTTCAAGAATAAAACACATCTTGCAGAGCTAGCATTAGAATGGGATTTGGAGCGGGACATTGAAGATTCAACAAAAGAAAGACAAGTACTTGAGGATCTGCAACCTTCCAGACATTTGGAGGAGTTGTCTATCAATGGCTATGGTGGCACACAATTTCCACGTTGGTTATCTGATAATTCTCTATTGAATATGGTGTCCCTAACCTTGAAGCACTGTAAACATTGTCTATGGTTGCCTTCCCTTGGACTTTTGACATTTCTGAAACACTTGACAATTGAGGACCTTGATGGGATAGAGAGCATAGGTGTTGATTTTTACGGGAATAGCTCTTGTGCATTTGCATCCTTGGAAATGTTGAGCTTTTGA 2469 0.3949 MPVLETLGGALFGAVLQLLFDKLDSHQVLGYFRQRDLDEKQLKKLKRKLMDINAVIDDAEQKQFTNSLVKEWLDEVRDILYDAEDLLEQIHYEYSKTKLEAEFHTSSSKVHIFESKIIALLDDLESLLNQRIVRDFKIYSGDRSGLGSKVSEKKVESTSLVVEEDIYGRDEDKEMIFNWLMSDTNDNKLSILSIVGMGGMGKTTLAQHVYNDMNTKEVKFDEKAWVCVSDEFDVFKLTRAIFEAIHKSTDDSRNLDTVQGRLKEKLTGRKFLLVLDDVWNEDRDQWKSLQTPLKYGAKGSKILITTRSNKVASAVGSNNTHELKQLREDHSWQVFAKHAFQDENCELNSELKEIGMQIVEKCKGLPLALETLGCLLRTKSSVSDWEGVLRSNIWDLPIENSKIMPALLLSYYHLPSHLKRCFAYCALYPKDHHFDKEKLIFSWMSQNFLHCSQESKSLEDVGEHYFNDLLSRSFFQQIITDIETYFVMHDLLNDLAKYVSGEICYSLDDREKRISRKTRHFLMAFDHVQYRESLYDAKGLRTFICISHYCMISIQELISNFKFLRVLSLYRCSEVPDTIGNLIHLRSLDLSYTYIERLPDSTSSLCNLQVLKLNGCFYLKELPSTLYELTNLRRLELMGTTLIKVPPLLGNLKNLQVWMDTFEVGKSCEFSVHQLQEVDLHGELSVRNLENMVNCCALGADFKNKTHLAELALEWDLERDIEDSTKERQVLEDLQPSRHLEELSINGYGGTQFPRWLSDNSLLNMVSLTLKHCKHCLWLPSLGLLTFLKHLTIEDLDGIESIGVDFYGNSSCAFASLEMLSF 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00283 822 Gene3D - 146 321 IPR027417 -
Viun11g00283 822 PANTHER DISEASE RESISTANCE PROTEIN RP 42 822 IPR044974 GO:0006952
Viun11g00283 822 Pfam NB-ARC domain 170 390 IPR002182 GO:0043531
Viun11g00283 822 FunFam Probable disease resistance protein At1g61300 148 320 - -
Viun11g00283 822 FunFam Probable disease resistance protein At1g63360 411 498 - -
Viun11g00283 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 425 IPR027417 -
Viun11g00283 822 PRINTS Disease resistance protein signature 603 619 - -
Viun11g00283 822 PRINTS Disease resistance protein signature 191 206 - -
Viun11g00283 822 PRINTS Disease resistance protein signature 362 376 - -
Viun11g00283 822 PRINTS Disease resistance protein signature 265 279 - -
Viun11g00283 822 Gene3D - 325 409 IPR042197 -
Viun11g00283 822 SUPERFAMILY L domain-like 487 808 - -
Viun11g00283 822 Pfam Rx N-terminal domain 13 104 IPR041118 -
Viun11g00283 822 Gene3D - 15 129 - -
Viun11g00283 822 Gene3D - 410 498 IPR036388 -
Viun11g00283 822 Coils Coil 42 62 - -
Viun11g00283 822 Gene3D Ribonuclease Inhibitor 526 822 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00283 Viun-Chr11 2420356 2422998 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00283 192 656 WRKY Transcription Factor Family AT5G45050 23.561 2.05e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00283 - - var:108339252 1196.42