Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00276 ATGAGAGCATCAACCTCTTCAATTCCCATTCCGTCGTCGTCGTCGTCGTCGCGTTTCTCCGTCTTCTTCTTCTTCCTTCTATTCGCACTCTTCGCCCTTCGATCTTCTTCCGGCGACTGCTCCCACTTCCATCGCCAGGCGCCGATGGCCACTGTCGGAGGCGTGCGCGACTCCCAAGGGTCTCAGAACAGTCTCGAGACTGAATCTCTCGCGCGATTCGCGGTTGACGAGCACAACAAGAAGCAGAATTCGCTTCTGGAGTTTGCTAGGGTTGTGAAGGCACAGGAACAGGTTGTTGCTGGTACCCTGCATCACCTTACTCTCGAGGCTATTGAGGGTGGTGAGAAGAAGCTCTATGAAGCCAAGGTATGGGTGAAACCATGGATGAACTTCAAAGAACTTCAAGAGTTCAAGCCTGCCGGTGTTGCATCACCATTTACCTCTGCTGACCTTGGTGTCAAAAGGGAGGGCCACAAATCAGGATGGCAATCTGTGCCAACACATGACCCTCAAGTTCAAGATGCAGCAAATCATGCAATCAAGACAATCCAGCAAAGGTCTAATTCATTAGTACCCTATGTGCTTCATGAGGTTGCTGATGCAAAGGCTGAGGTGATTGATGATTTTGCCAAGTTTAATCTGCTTCTCAAAGTCAAGCGGGGAGACAAGGAAGAGAAGTTCAAGGTAGAAGTACACCAGAACAATGAAGGGGCACTACATCTAAATCAGATGGAACAAGATCATTCTTAA 750 0.4907 MRASTSSIPIPSSSSSSRFSVFFFFLLFALFALRSSSGDCSHFHRQAPMATVGGVRDSQGSQNSLETESLARFAVDEHNKKQNSLLEFARVVKAQEQVVAGTLHHLTLEAIEGGEKKLYEAKVWVKPWMNFKELQEFKPAGVASPFTSADLGVKREGHKSGWQSVPTHDPQVQDAANHAIKTIQQRSNSLVPYVLHEVADAKAEVIDDFAKFNLLLKVKRGDKEEKFKVEVHQNNEGALHLNQMEQDHS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00276 249 PANTHER CYSTATIN FAMILY MEMBER 42 196 IPR027214 GO:0004869
Viun11g00276 249 FunFam Cysteine proteinase inhibitor 159 248 - -
Viun11g00276 249 Gene3D - 49 145 - -
Viun11g00276 249 FunFam Cysteine proteinase inhibitor 49 147 - -
Viun11g00276 249 CDD CY 53 139 IPR000010 GO:0004869
Viun11g00276 249 ProSitePatterns Cysteine proteases inhibitors signature. 96 109 IPR018073 -
Viun11g00276 249 SMART CY_4 50 140 IPR000010 GO:0004869
Viun11g00276 249 SUPERFAMILY Cystatin/monellin 49 141 IPR046350 -
Viun11g00276 249 Gene3D - 151 245 - -
Viun11g00276 249 SUPERFAMILY Cystatin/monellin 157 236 IPR046350 -
Viun11g00276 249 Pfam Aspartic acid proteinase inhibitor 68 139 IPR000010 GO:0004869
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00276 Viun-Chr11 2346546 2351013 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00276 - - gmx:100499887 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00276 11 2346546 2351013 Viun11g00276 11 2346546 2351013 ECH