Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00274 ATGGGCACAAAAAAGCTTGGAGGTTGTGCAAAGTTTTTTGAATGCTCAAAACCCTACTTGGCTATGATTTCTTTACAGTTTGGTTATGCTGGCATGACCATTATCACTAAGATTTCACTCAACCATGGCATGAGTCATTATGTTCTTGTGGTTTTTCGTCATGCTTTTGCTACCATCGCCATAGCTCCTTTTGCATTTATTTTTGAAAGGAAAGGTCAACCGAAGATAACATTCTCAATTTTCATGCAAATTTTTATCCTAGCTCTTCTGGGGCCAGTGATTGATCAAAATTTCTTTTATGCTGGGTTGAAACTCACATCCCCAACTTTCGCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTAATAGCAGTGTTTTGCAGGATGGAGAAGATAAACATAAAGCAAGTGAGAAGCATAGCAAAGATAGTGGGAACTTTAGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCTATTGTAGAGATGGTTTGGTTCAAACAAGCTCACTATAAAACCAATGGAGGATCATTGGACAGAGATTGGTTATTAGGCTGCATTTTTCTCATCATTTCCACCATTGCTTGGGCTTCACTCTTCGTTTTACAAGCAAAAGCTATACAGACATACAAGAATCATCAACTAACCCTAACTTCACTTGTGTGCTTTATAGGCACAGTTCAAGCTATTGTTGTTACTTATGTTGTTGAACACAAACCTTCAGTTTGGAAAATTGGATGGGATATAAACTTGCTTACTGCTGCATATTCAGGGATTGTTTCATCAAGCATATCATACTATGTACAAGGATTGGTAATTGAGAAGAAAGGACCTGTGTTTGCAACTTCCTTTAGCCCTTTAATGATGATCATTTCTGCTGTCATGGGTTACTTTATCCTTGCAGAAAAAACTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTGATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAATTAGAGAGTCAAGTGGAAGCTGGAATTCCCTTGCCTGTAAATGATGCTGAAAGTTCAGCATCAGAAGAGGAAAATATGGTTGATGCTAGAGATAATTTCACTGAAGAAAAACATGATCAGAAAGTAGAACCTATCAGTATCAAATTCTCTTCAATTGTAATTACGTTGTCTATTCAAGAGTCTCCTACTAGATAA 1200 0.3783 MGTKKLGGCAKFFECSKPYLAMISLQFGYAGMTIITKISLNHGMSHYVLVVFRHAFATIAIAPFAFIFERKGQPKITFSIFMQIFILALLGPVIDQNFFYAGLKLTSPTFACAMSNMLPAMTFVIAVFCRMEKINIKQVRSIAKIVGTLVTVAGAMLMTLYRGPIVEMVWFKQAHYKTNGGSLDRDWLLGCIFLIISTIAWASLFVLQAKAIQTYKNHQLTLTSLVCFIGTVQAIVVTYVVEHKPSVWKIGWDINLLTAAYSGIVSSSISYYVQGLVIEKKGPVFATSFSPLMMIISAVMGYFILAEKTYLGGVIGAILIVIGLYSVLWGKHKEQLESQVEAGIPLPVNDAESSASEEENMVDARDNFTEEKHDQKVEPISIKFSSIVITLSIQESPTR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00274 399 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0016020|GO:0022857
Viun11g00274 399 MobiDBLite consensus disorder prediction 352 374 - -
Viun11g00274 399 MobiDBLite consensus disorder prediction 358 374 - -
Viun11g00274 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Viun11g00274 399 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020
Viun11g00274 399 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020
Viun11g00274 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00274 Viun-Chr11 2329933 2332141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00274 1 396 Nodulin-like Gene Family AT5G07050 60.741 2.08e-175 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00274 - - gmx:100804390 599.742