Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00273 ATGGCTACCGAAAAGCTTGGAGGTTGTGCAAAGTTCTTTGCAAGCTCCAAACCCTACTTGGCTATGATCTCTCTGCAGTTTGGCTATGCTGGCATGAACATCATCACAAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGTCACGCTTTCGCAACTGCTGTTATAGCTCCTTTTGCATTTATCTTTGAAAGGAAAGGTCAACCGAAGATAACATTTCCAGTTTTCATGCAAATTTTTATCCTAGCTCTTCTTGGGCCAGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCTGTGTTTTGCAGAATGGAGAAGATAAACATGAAGCAAGTGAGATGCATAGCAAAGGTAGTGGGAACATTAGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCTATAGTGGAGATGTTTTGGGCCAAACATCCCCACAATAAGGCCAATGGAGCAACCAGCACAGGATCATTGGACAAAGATTGGTTCTTAGGATGCATCTTTCTTATCATTGCCACCCTTGCATGGGCTTCACTCTTTGTTTTACAAGCCAAAGCTATACAAACCTACAAGAATCATCAACTCAGCCTCACTTCACTTGTGTGCTTTATAGGCACTGTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAACCCTTCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGTATATCATATTATGTACAAGGACTGGTGATTAAGAAGAAAGGACCTGTCTTTGCAACTGCTTTTAGTCCTTTAATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCTGAACAAATTTATCTTGGAGGAGTGATTGGTGCCATCTTAATTGTGATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAATAGAGAGTAAAGTGGCAGATGAAATTCCATTGCCAGTAAAAGATGGTCAAAGTTCTGTAATTTCAGGGCTAAATATGATGGATGTGACAAATGATTTTAGTGAAGAAAAATATGTTCAGAAAGAAGATTTCAAGAATAACAAGGCCTCCTCAGTTGTAATAAGCATGCCTATTGCAGAGCCTCTAACCAAAGATAACAAAGAGGGAAAGGCTTAA 1233 0.4055 MATEKLGGCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFPVFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKINMKQVRCIAKVVGTLVTVAGAMLMTLYRGPIVEMFWAKHPHNKANGATSTGSLDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTVQAIAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDGQSSVISGLNMMDVTNDFSEEKYVQKEDFKNNKASSVVISMPIAEPLTKDNKEGKA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00273 410 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0016020|GO:0022857
Viun11g00273 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Viun11g00273 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 337 - -
Viun11g00273 410 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Viun11g00273 410 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00273 Viun-Chr11 2321949 2324680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00273 1 405 Nodulin-like Gene Family AT5G07050 65.610 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00273 - - gmx:100804390 722.235